Gene Information

Name : Ser39006_0521 (Ser39006_0521)
Accession : YP_008520903.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 570910 - 572319 bp
Length : 1410 bp
Strand : -
Note : KEGG: glnA, glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region, glutamine synthetase beta-Grasp

DNA sequence :
ATGTCTGCAGAAAATGTTTTGACGATGCTGAATGAACATGAAGTGAAGTTTGTTGATCTTCGCTTCACTGATACCAAAGG
TAAGGAACAGCACGTCACTATTCCAGCACATCAAGTCAATGCTGACTTTTTTGAAGACGGCAAAATGTTTGATGGTTCTT
CGATTGGTGGCTGGAAAGGTATCAACGAATCAGACATGGTATTAATGCCCGATCCGACTACTGCAGTTCTGGATCCTTTC
TTCGAAGAAACCACACTGAACATCCGTTGCGACATTCTGGAACCAGCCACAATGCAGGGCTACGATCGCGACCCGCGTTC
TATCTCTAAACGCGCCGAAGATTTCCTGCGCTCTTCTGGTATCGCGGATACCGTACTGTTCGGGCCTGAGCCGGAATTTT
TCCTGTTTGACGATGTCCGTTTCGGCAGCAGCATTTCTGGTTCACACGTATCTATCGATGACATCGAAGCGGCGTGGAAT
AGCAGCAAACAATATGAAGGTGGCAACAAAGGCCATCGTCCGTCAGTAAAAGGTGGTTACTTCCCGGTTCCACCAGTAGA
TTCATCACAGGATCTCCGTTCGACCATGTGTCTGACCATGGAACAGATGGGCCTGGTTGTTGAAGCTCATCACCATGAAG
TAGCGACTGCCGGTCAGAACGAAATAGCCACCCGCTTCAATAGTATGACCAAAAAAGCTGACGAAATTCAGATTTACAAA
TATGTCGTACATAACGTAGCTCACGTGTTTGGTAAAACGGCAACCTTCATGCCAAAACCAATGTTCGGTGACAACGGCTC
AGGTATGCATTGCCATATGTCTCTGTCCAAAGACGGTGCCAACCTGTTCTCTGGTGATAAATACGGCGGTCTGTCTGAAA
CAGCGTTGTACTACATCGGTGGTATCATTAAACACGCGAAAGCCATTAATGCCTTGACCAACCCAACAACCAACTCTTAC
AAGCGTCTGGTCCCAGGGTATGAAGCACCGGTCATGCTGGCCTACTCAGCCCGTAACCGCTCTGCTTCGATTCGTATTCC
AGTCGTTTCCAGCCCGAAAGCACGCCGTATCGAGGTCCGTTTCCCGGATCCTGCTGCCAACCCGTATCTGGCCTTCGCAG
CTCTGCTGATGGCTGGCCTGGACGGTATCATCAACAAAATCCATCCTGGTGATGCCATGGATAAGAATCTGTATGATTTA
CCGGCAGAAGAAGCGAAAGAAATCCCAACTGTAGCGGGTTCACTGGAAGAAGCACTAAATGCGCTGAATGCCGACCGTGA
GTTCCTGACCCGCGGTGGCGTGTTCACTGAAGACTCAATTGATGCTTACATCGAATTGCGTAAATCAGAGGACGACCGTG
TTCGTATGACACCACATCCGGTCGAATTCGAACTGTACTACAGCGTTTAA

Protein sequence :
MSAENVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEDGKMFDGSSIGGWKGINESDMVLMPDPTTAVLDPF
FEETTLNIRCDILEPATMQGYDRDPRSISKRAEDFLRSSGIADTVLFGPEPEFFLFDDVRFGSSISGSHVSIDDIEAAWN
SSKQYEGGNKGHRPSVKGGYFPVPPVDSSQDLRSTMCLTMEQMGLVVEAHHHEVATAGQNEIATRFNSMTKKADEIQIYK
YVVHNVAHVFGKTATFMPKPMFGDNGSGMHCHMSLSKDGANLFSGDKYGGLSETALYYIGGIIKHAKAINALTNPTTNSY
KRLVPGYEAPVMLAYSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLAFAALLMAGLDGIINKIHPGDAMDKNLYDL
PAEEAKEIPTVAGSLEEALNALNADREFLTRGGVFTEDSIDAYIELRKSEDDRVRMTPHPVEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-100 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_0521 YP_008520903.1 glutamine synthetase, type I VFG1399 Protein 4e-116 52