Gene Information

Name : Ser39006_4130 (Ser39006_4130)
Accession : YP_008524512.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4654413 - 4655702 bp
Length : 1290 bp
Strand : -
Note : KEGG: arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein

DNA sequence :
ATGTTTCTGGCAGGCGCTATTTTTGTCCTGACCATCGTTTTGGTTATCTGGCAGCCTAAGGGATTAGGGATCGGCTGGAG
TGCGACGCTGGGCGCGGTACTGGCATTGATTTCAGGCGTTGTACACATGGGCGATATCCCCGTGGTTTGGAATATCGTCT
GGAATGCTACGGCAACGTTTATTGCCGTTATCATCATCAGCCTGCTTCTGGATGAATCCGGCTTTTTCGAATGGGCGGCG
CTGCATGTTTCGCGTTGGGGCAATGGGCGAGGTCGTTTGCTGTTTACCTATATCGTTCTGCTCGGTGCAGCGGTGGCGGC
ACTGTTTGCCAACGATGGCGCGGCACTTATTCTGACGCCGATAGTCATCGCCATGCTACTGGCATTAGGGTTCAGCAAAG
GCACGACACTGGCATTCGTTATGGCTGCCGGGTTTATTGCCGATACAGCCAGTCTACCGCTTATCGTGTCGAACCTGGTG
AACATCGTTTCTGCAGACTTCTTTGGACTGGGCTTCACTGAGTATGCGTCGGTAATGGTGCCGGTAGATATCGCCGCCAT
TATTGCCACGCTGGTGATGCTGCACCTGTTCTTTCGCAAAGATATTCCGCCGACCTACGACCTGGCTCTCCTGAAAGCAC
CGGCAAAAGCGATTAAAGATCTGGCAACCTTCAGAACCGGCTGGATAGTTTTGATTCTTCTGCTGGTTGGCTTTTTCGTC
CTTGAGCCGCTCGGTATCCCGGTCAGCGCGATTGCGGCTGTTGGGGCTGTCATCCTGTTTGCGGTGGCGAAACGAGGCCA
TGCAATTAATACCGGCAAAGTGCTGCGTGGTGCACCGTGGCAGATAGTCATCTTCTCGCTGGGGATGTATCTGGTGGTCT
ATGGCCTGCGTAACGCCGGGCTAACGGAATACCTCTCCGGCGTACTGAACGTGCTGGCAGAAAAAGGCCTTTGGGTTGCG
ACGTTTGGTACTGGCTTCCTCACTGCTTTCTTGTCTTCCATCATGAACAACATGCCTACCGTGCTGGTTGGCGCTCTCTC
TATTGATGGCAGCACCGCAACAGGCGTTATAAAAGAGGCGATGATTTATGCCAACGTGATTGGCTGCGATCTTGGGCCGA
AAATCACCCCGATTGGTAGCCTGGCAACGCTGCTCTGGCTGCATGTCCTTTCACAGAAGAATATGACCATCACCTGGGGA
TACTATTTCCGCACCGGGATCGTCATGACTCTGCCTGTGCTGTTTGTAACGCTGGCCGCGCTGGCGCTACGTCTCTCTTT
CACTTTGTAA

Protein sequence :
MFLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALISGVVHMGDIPVVWNIVWNATATFIAVIIISLLLDESGFFEWAA
LHVSRWGNGRGRLLFTYIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
NIVSADFFGLGFTEYASVMVPVDIAAIIATLVMLHLFFRKDIPPTYDLALLKAPAKAIKDLATFRTGWIVLILLLVGFFV
LEPLGIPVSAIAAVGAVILFAVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLAEKGLWVA
TFGTGFLTAFLSSIMNNMPTVLVGALSIDGSTATGVIKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTITWG
YYFRTGIVMTLPVLFVTLAALALRLSFTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-160 95
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-95 60
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-93 59
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-97 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_4130 YP_008524512.1 arsenical pump membrane protein BAC0576 Protein 1e-164 99
Ser39006_4130 YP_008524512.1 arsenical pump membrane protein BAC0578 Protein 2e-163 98
Ser39006_4130 YP_008524512.1 arsenical pump membrane protein BAC0031 Protein 2e-159 94
Ser39006_4130 YP_008524512.1 arsenical pump membrane protein BAC0577 Protein 1e-153 91
Ser39006_4130 YP_008524512.1 arsenical pump membrane protein BAC0575 Protein 1e-97 60
Ser39006_4130 YP_008524512.1 arsenical pump membrane protein BAC0574 Protein 9e-96 60