Gene Information

Name : Ser39006_3969 (Ser39006_3969)
Accession : YP_008524351.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 4467374 - 4469368 bp
Length : 1995 bp
Strand : -
Note : SMART: Transketolase central region; TIGRFAM: transketolase; KEGG: transketolase; PFAM: Transketolase domain-containing protein, Transketolase central region

DNA sequence :
ATGTCCTCTCGTAAAGAACTTGCCAATGCTATCCGTGCACTGAGCATGGATGGCGTGCAAAAGGCCAAATCCGGTCATCC
TGGCGCCCCAATGGGCATGGCGGATATCGCCGAAGTCCTGTGGCGTGATTACCTGAGCCACAACCCTTCCAATCCGCATT
GGGCTAACCGCGACCGCTTTGTGCTGTCTAACGGTCATGCTTCCATGCTGATTTACAGCCTGTTGCACCTCACTGGCTAT
GACCTGCCAATTGAAGAGTTGAAAAATTTCCGTCAGCTGCACTCCAAAACACCGGGTCACCCGGAAGTGGGCCACACCGT
AGGCGTGGAAACCACCACCGGTCCGTTGGGGCAGGGGATTGCCAACGCGGTAGGGATGGCGATCGCCGAGCGCACCATGG
CGGCGCAGTTCAACCGCCCTGGTCATGAGATTGTCGACCACCACACCTATGTGTTCATGGGTGATGGCTGCATGATGGAA
GGGATCTCCCACGAAGTCTGTTCGCTGGCGGGTACGCTGAAGCTGGGTAAGCTGGTGGCATTCTATGATGACAACGGCAT
TTCTATTGACGGCCACGTTGATGGCTGGTTCACCGACGATACGGCAGCCCGTTTTGAAGCCTACGACTGGCACGTGATCC
GTGGTATTGATGGTCACGATGCCGATGCCATCAAGCGCGCTATCGTTGAAGCACAACAGGTTTCTGATAAACCGTCGCTG
CTGATGTGTAAAACCGTGATTGGTTTCGGTTCGCCAAACAAGGCCGGTACGCATGATTCACACGGTGCGCCGCTGGGTGA
TGCTGAAGTGGCCGCGACCCGCGAACAACTGGGCTGGAAATACGGACCGTTTGAAATTCCGGCAGAAATGTATGCCGAGT
GGGATGCGCGTGAAACGGGTCAGCGTAAAGAGTCTGCCTGGAATAAGGCGTTTGACGCTTATGCCAGTGCTTATCCTGAT
CTGGCAGTCGAATTTACCCGCCGAATGAACGGTGAACTGCCGGCAAACTGGCAGGAAGAATCAGCGAAAGTGGTTGAACA
GTGGCAGGCGAATCCTGCCAAGATTGCCAGCCGTAAAGCCTCACAGAATGCACTGGAAGCGTATGGAAAACTGTTGCCGG
AATTCCTGGGCGGCTCTGCCGATCTGGCCCCGAGCAACCTGACCATCTGGTCTGGTTCGAAAGCGTTGAATGAAGATGCG
GCCGGTAACTACATCCACTATGGCGTGCGCGAATTTGGTATGACCGCGATTGCTAACGGTATCTCCTTGCACGGTGGTTT
TGTGCCGTATACCGCGACGTTCCTGATGTTTGTGGAATACGCCCGTAATGCGGTGCGTATGGCGGCGCTGATGAAAATAC
GCAGCATCTATGTGTATACCCATGATTCGATTGGTCTGGGTGAAGACGGACCGACGCATCAGCCGGTAGAGCAACTGGCC
AGCTTGCGGGTGACGCCGAACATGAGTACCTGGCGGCCGGCAGACCAGGTAGAAACTGCGGTAGCCTGGAAATACGCGAT
TGAACGTAAAGATGGCCCGACAGCCTTGATTCTGTCACGTCAGAATCTTGCACAGCAGGAACGCTCGGCACAGCAGTTGG
CCGATGTGGCGAAAGGGGCTTACGTGCTGAAAGACAGTAATGGTCAGCCGGACGTCATCCTGATAGCCACCGGTTCAGAA
GTCGACCTGGCGGTCAGCGCGTATAGGAAACTGACAGAAGAGGGCATCAAGGCCCGCGTGGTATCGATGCCCTCGACGGA
TGCGTTTGACAAGCAGGATGCGGCCTACCATGAAGCGGTGCTGCCGAAAGGGGTGCCGGCGCGAGTGGCGATTGAAGCGG
GGATTGCGGATTACTGGTACAAGTATGTGGGTCTGAACGGCGCGATAGTGGGAATGACGAGCTTCGGTGAATCAGCCCCG
GCCGAACTGCTGTTTGAAGAGTTTGGTTTCACCACTGAGAACGTGGTTGCCAAAGCGAAGGCGCTGTTGAAGTAA

Protein sequence :
MSSRKELANAIRALSMDGVQKAKSGHPGAPMGMADIAEVLWRDYLSHNPSNPHWANRDRFVLSNGHASMLIYSLLHLTGY
DLPIEELKNFRQLHSKTPGHPEVGHTVGVETTTGPLGQGIANAVGMAIAERTMAAQFNRPGHEIVDHHTYVFMGDGCMME
GISHEVCSLAGTLKLGKLVAFYDDNGISIDGHVDGWFTDDTAARFEAYDWHVIRGIDGHDADAIKRAIVEAQQVSDKPSL
LMCKTVIGFGSPNKAGTHDSHGAPLGDAEVAATREQLGWKYGPFEIPAEMYAEWDARETGQRKESAWNKAFDAYASAYPD
LAVEFTRRMNGELPANWQEESAKVVEQWQANPAKIASRKASQNALEAYGKLLPEFLGGSADLAPSNLTIWSGSKALNEDA
AGNYIHYGVREFGMTAIANGISLHGGFVPYTATFLMFVEYARNAVRMAALMKIRSIYVYTHDSIGLGEDGPTHQPVEQLA
SLRVTPNMSTWRPADQVETAVAWKYAIERKDGPTALILSRQNLAQQERSAQQLADVAKGAYVLKDSNGQPDVILIATGSE
VDLAVSAYRKLTEEGIKARVVSMPSTDAFDKQDAAYHEAVLPKGVPARVAIEAGIADYWYKYVGLNGAIVGMTSFGESAP
AELLFEEFGFTTENVVAKAKALLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 82
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 68