Gene Information

Name : Ser39006_3875 (Ser39006_3875)
Accession : YP_008524257.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.2.9
Position : 4353411 - 4354724 bp
Length : 1314 bp
Strand : -
Note : PFAM: Mur ligase middle domain protein, cytoplasmic peptidoglycan synthetase domain protein; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; HAMAP : UDP-N-acetylmuramoylalanine--D-glutamate ligase; KEGG: murD, UDP-N-acetylmuramoyl-L-alanine:D-glu

DNA sequence :
ATGGACTATCAGGGTAAAAAAGTTGTCATTATCGGGTTGGGCCTGACCGGGCTTTCCTGTGTTGATTTCTTCCTTACGCG
CGGGGTGGTACCCCGCGTGGTGGATACCCGTATCAGTCCGCCAGGCCTGGACAAACTGCCGGAACATGTTGAGCGTTATC
TGGGAGGTTTGCATGACGATTGGTTAATGAGCGCCGATCTGATTGTCGCCAGCCCCGGTATTGCATTATCTACACCCGTG
CTTGGTTCTGCCGCAGAGGCAGGCATTGAAATTGTGGGTGATATCGAACTGTTCTGCCGCGAGGCGCAAGCGCCTATCGT
GGCTATCACCGGTTCCAATGGTAAAAGTACTGTTACCACGCTGGTCGGGGATATGGCTCGTACGGCAGGTTGGGCTGTGG
GTGTGGGGGGAAATATCGGTGTACCGGCGTTGCAATTGCTGAAGCAGGAATGCCAATTGTATGTGCTGGAGTTATCGAGC
TTCCAACTGGAAACCACCAGTAGCCTGCATGCGGCGGCAGCAACCATTCTGAACGTGACGGAAGATCATACCAACCGCTA
TCCGCTGGGGTTGCAGCAGTATCGTGCGGCCAAACTCCGTATTTATGAGAATGCCAAGGTCTGTATCGTGAACGCGGATG
ACGCACTCACGATGCCAATCCGTGGCGCTGATGAGCGATGCCTCAGTTTTGGTGTGGATGTGGGTGATTATCATCTTAAC
CGTCAGCAGGGGGAAACCTGGTTGCGGGTTAAAGGTGAGCGTGTCATCAACACGCGTGAAATCAAACTGGTCGGACAGCA
TAACTACACCAATGTCTTGGCCGCACTGGCATTGGCAGATGCAGTCGGCATTCCACGCTCATCAGCCTTGACAGCCCTGA
CCACTTTTACTGGTCTGGCGCACCGTTTTCAACTGGTGCTGGAACGCCGGGGGATTCGCTGGATTAACGATTCGAAAGCG
ACCAACGTCGGCAGTACGGAAGCCGCATTAAGTGGACTGGTTGTCGATGGCACGCTGCATCTGTTGTTAGGCGGGGATGG
TAAGTCCGCGGATTTCTCACCACTACTGACCTATATCCAGGGTGACAATATCCGTCTTTATTGCTTTGGTCGCGATGGTG
GATTGCTGGCGGCACTGCGGCCTGAAATAGCTGAGCAGACAGAAACGATGACGCAGGCAATGCATCTGATTGCCGATCGG
GCAAGAGCCGGGGATGTTGTGTTGCTGTCACCTGCCTGCGCCAGTCTTGACCAATTCCGAAGTTTTGAACAGCGCGGCGA
TGAGTTCGCTCGTCTGGCAGAGGAGCTGGGATAA

Protein sequence :
MDYQGKKVVIIGLGLTGLSCVDFFLTRGVVPRVVDTRISPPGLDKLPEHVERYLGGLHDDWLMSADLIVASPGIALSTPV
LGSAAEAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGDMARTAGWAVGVGGNIGVPALQLLKQECQLYVLELSS
FQLETTSSLHAAAATILNVTEDHTNRYPLGLQQYRAAKLRIYENAKVCIVNADDALTMPIRGADERCLSFGVDVGDYHLN
RQQGETWLRVKGERVINTREIKLVGQHNYTNVLAALALADAVGIPRSSALTALTTFTGLAHRFQLVLERRGIRWINDSKA
TNVGSTEAALSGLVVDGTLHLLLGGDGKSADFSPLLTYIQGDNIRLYCFGRDGGLLAALRPEIAEQTETMTQAMHLIADR
ARAGDVVLLSPACASLDQFRSFEQRGDEFARLAEELG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 2e-55 43
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 2e-55 43