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Name : Ser39006_3857 (Ser39006_3857) Accession : YP_008524239.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 4334389 - 4335807 bp Length : 1419 bp Strand : + Note : KEGG: hofB, hypothetical protein; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGATGAATAATGACCTGTCCAAAGAACTATCATCCCTATGCCACCGCTACCATGCGCTATTGCTGGACATGGATGACCA GACCTTATCCATCGCCATCAACGGTACTGAATCGAAAGAGTTAATTTCTGCTCTGCGTTTTGCCAGCAACCGACATGTAT TGATTGAACAGTGGCCTGTAGCCAGATTAGAGCAACATCTGAACCCTTATCAGGAGACAGAAAATGTACAACAGCATCAG GCGGCGCCAAACACAATAGACGACGGTGAAGATGCACCAGTAGTGCAATTCATCAACCAAACCCTGAAGTTGGCAATACA GCGACGCGCATCCGATATCCATTTTGAACCACTGACGTCTGGCTATCGTGTTCGGTTGCGCATCGATGGTGTATTGCAAG AAGTTCCATCAGTTGCTGCTGAACTGTCCCCGCGTATCACTGCAAGGCTCAAGATTATGGGGAAGCTGAATATTGCAGAA CGACGACTGCCTCAGGATGGGCAATTCAGTCTGTCACTGGACCAACAATCCTACTCATTTCGTATCGCCACGTTGCCGGT GCAGGAAGGCGAAAAAGTGGTGCTCCGGGTACTACAGACCCATCAGCACGCACTTACACTGGAAACGCTGGGGCTCTCTC CGGTGGCATTACAACAATTTATGAAAACACTTCAGTTGCCTCAGGGCATGATTTTAGTGACTGGCCCCACTGGCAGTGGG AAAACCTTTACACTCTACAGCGCCATTCGCTGGCTCAACGACACCAGTCGTAATATATGCAGTGTGGAAGACCCCGTGGA AATACCACTTACGGGCATTAATCAAACAGCGATAAACACCAAGAATAACCTGAGCTTTGGGCGAGTATTGCGGGCGCTGT TGCGACAAGATCCAGATGTGATTATGGTCGGTGAAATCCGTGATGCCGAAACAGCCGAAATAGCAGTGAATGCGGCACAA ACCGGGCACTTAGTGCTATCCACCTTGCACACTAACTCAGCCGCTGAAACACTTACTCGGCTAAGGCAATTGGGCGTTCC CGGCTATTTATTAGCCGCAGCGCTAAGACTGATCATCTCTCAGCGTCTGGTTCGTCGGTTGTGTCCTTACTGCCGCACGG CCACAACACCAGAACTATCTTTACCACCACATCTCTGGCAAGGCTCGTTACACCGCTGGACAGCCCAAGGATGCAACCAC TGTTTCTCCGGTTATTACGGCCGTGCAGCCATTTACGAATTGTTGGTTATCACACCTGACATGCAGCAGGCATTAGCAGA AGACATTCCGGTCCAACAAGCCGCCCACGCCTCTTCAACTGTATTCCCTTCGTTACTATCTGCCGGATTATCTCTGGTTA ATGAAGGTGTTACCTCTCAAGAAGAAGTCTATCGGGTCATAGGTGATATTACAAATTAA Protein sequence : MMNNDLSKELSSLCHRYHALLLDMDDQTLSIAINGTESKELISALRFASNRHVLIEQWPVARLEQHLNPYQETENVQQHQ AAPNTIDDGEDAPVVQFINQTLKLAIQRRASDIHFEPLTSGYRVRLRIDGVLQEVPSVAAELSPRITARLKIMGKLNIAE RRLPQDGQFSLSLDQQSYSFRIATLPVQEGEKVVLRVLQTHQHALTLETLGLSPVALQQFMKTLQLPQGMILVTGPTGSG KTFTLYSAIRWLNDTSRNICSVEDPVEIPLTGINQTAINTKNNLSFGRVLRALLRQDPDVIMVGEIRDAETAEIAVNAAQ TGHLVLSTLHTNSAAETLTRLRQLGVPGYLLAAALRLIISQRLVRRLCPYCRTATTPELSLPPHLWQGSLHRWTAQGCNH CFSGYYGRAAIYELLVITPDMQQALAEDIPVQQAAHASSTVFPSLLSAGLSLVNEGVTSQEEVYRVIGDITN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-69 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-70 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ser39006_3857 | YP_008524239.1 | type II secretion system protein E | VFG0112 | Protein | 4e-87 | 48 |
| Ser39006_3857 | YP_008524239.1 | type II secretion system protein E | VFG0182 | Protein | 6e-77 | 46 |
| Ser39006_3857 | YP_008524239.1 | type II secretion system protein E | VFG1880 | Protein | 5e-89 | 46 |
| Ser39006_3857 | YP_008524239.1 | type II secretion system protein E | VFG2426 | Protein | 8e-80 | 45 |
| Ser39006_3857 | YP_008524239.1 | type II secretion system protein E | VFG1876 | Protein | 7e-75 | 43 |
| Ser39006_3857 | YP_008524239.1 | type II secretion system protein E | VFG2048 | Protein | 5e-71 | 43 |
| Ser39006_3857 | YP_008524239.1 | type II secretion system protein E | VFG0233 | Protein | 3e-73 | 43 |
