Gene Information

Name : Ser39006_3800 (Ser39006_3800)
Accession : YP_008524182.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : single-strand binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4266867 - 4267421 bp
Length : 555 bp
Strand : +
Note : KEGG: single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n

DNA sequence : 
ATGGCCAGCAGAGGCGTTAATAAAGTGATACTTCTCGGGCATCTGGGACAAGACCCCGAAGTCCGTTACATGCCGAATGG
TGGCGCGGTAGCCAATATTACCCTGGCCACTTCCGAAGCCTGGCGCGACAAGCAGACCGGCGAGCAGAAAGAAAAGACAG
AATGGCACCGCGTAGTACTGTTTGGCAAACTGGCAGAAGTCGCGGGTGAATATCTCCGCAAAGGGTCTCAGGTTTATATT
GAAGGCCAGCTTCAGACTCGCAAATGGACAGATCAAAGTGGGCAGGATCGTTACACCACCGAAGTGGTGGTCAACGTTGG
CGGCACCATGCAGATGATCGGTGGCCGTGCAGGCGGCGGTGCGGCAGCGCCAGGTGGTGCGGCGCCAGCAGGTGGCGGGA
ATCCACAACAAGGTGGCTGGGGACAACCACAGCAACCACCTGCCGCCAACCAGTTCAGCGGTGGCGCACAGGCAGCGGCA
CCACGCCCGCAAAACACGCCAGCACCCAGCAGCAACGAACCGCCGATGGATTTTGACGACGATATTCCGTTTTAG

Protein sequence : 
MASRGVNKVILLGHLGQDPEVRYMPNGGAVANITLATSEAWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWTDQSGQDRYTTEVVVNVGGTMQMIGGRAGGGAAAPGGAAPAGGGNPQQGGWGQPQQPPAANQFSGGAQAAA
PRPQNTPAPSSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 9e-39 66
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 1e-43 60
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 1e-43 60
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 1e-43 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_3800 YP_008524182.1 single-strand binding protein VFG0576 Protein 6e-49 72