|
Name : Ser39006_3756 (Ser39006_3756) Accession : YP_008524138.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Unknown Product : Integrase catalytic region Function : - COG functional category : - COG ID : - EC number : - Position : 4205122 - 4206144 bp Length : 1023 bp Strand : + Note : PFAM: Integrase catalytic region, Transposase IS30-like HTH domain; KEGG: Integrase catalytic subunit DNA sequence : ATGTTGACATTGGAGTTACGCGTGGAGATTGCAGTTCTTTTACGTCAGGGCATGTCTATTCGGGGTATTGCCCGGCAGCT TTCATGTTCCCGCCAGACCGTCCGCCGTTATATTCACATGCAGGACTCACCTGCTAAAGCTCGTTATTCTGCACGCCTTC CCCGACCCGGGAAGCTGGACCCGTTTAAGCCCTATATTCTTGAACGTGTTGACGCTGCCAGACCTCATTGGATACCGGCC AGCGTTATGCTGAGTGAGATCCAACTTCGCGGGTACTCCGGTGGATACAGCATGCTGACGGCTTTCTTGCTTCCGCTTAA GCAACAGCCGAACGATCCCGTCGTGCGTTTTGAGACGCAGCCCGGTGAGCAGATGCAGGTCGATTTTACGGTGATCAGAC AGGGCCGACACCCGTTGCTGGCATTTGTCGCTACACTGGGCTGGAGTCGGGCAACCTTTGTACGTTTTTATCCCCGCCAG GATACGGCAGCATGGTGTGACGGTATTGAACAGGCGCTTTTGGCCTTTGGCGGAACGCCGAGACATCTCCTGTTTGATAA TGCCAAGACCATTATTCTTGAACGTGACGTTTATGGCGATGGCCGTCACCGGTGGAACCCGCCATTGCTGGCTCTCGCCG AGAAGTACGGTTTTACTCCCCGAGTGTGCAGGCCTTATCGCGCAAAGACCAAGGGTAAAGTTGAACGATTCAATCGCTAT CTGAAGCATAGCTTTGTCGTCCCGCTGGCCACCACGTTTAAGCAGGCCGGGCTGTTGCTTGATGTGGACTCAGCCAACAG CCGCATCGGGCCGTGGCTGATCACCGTAGCCAATGCCCGCAAGCATGGCACGACCGGTGTCGCACCAGAACACCGGTTGC AACAGGAGTTGGCTGCGCTGCTTCCCCTTCCTCGAGTGGGAAGAACGATACCCGTCGCCACGGATAATCAAAGAGTTATG CCAAGAGAGAGTTTTCAACATCCACTGTCTGTCTATCAGTCGCTGTTGGAGGCTGGATTATGA Protein sequence : MLTLELRVEIAVLLRQGMSIRGIARQLSCSRQTVRRYIHMQDSPAKARYSARLPRPGKLDPFKPYILERVDAARPHWIPA SVMLSEIQLRGYSGGYSMLTAFLLPLKQQPNDPVVRFETQPGEQMQVDFTVIRQGRHPLLAFVATLGWSRATFVRFYPRQ DTAAWCDGIEQALLAFGGTPRHLLFDNAKTIILERDVYGDGRHRWNPPLLALAEKYGFTPRVCRPYRAKTKGKVERFNRY LKHSFVVPLATTFKQAGLLLDVDSANSRIGPWLITVANARKHGTTGVAPEHRLQQELAALLPLPRVGRTIPVATDNQRVM PRESFQHPLSVYQSLLEAGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| y1093 | CAD33720.1 | ORF A protein | Not tested | PAI I 536 | Protein | 4e-56 | 44 |
| s0035 | CAD33773.1 | ORF A protein | Not tested | PAI I 536 | Protein | 7e-57 | 44 |
| y1094 | CAD42088.1 | OrfA protein of IS100 transposase | Not tested | PAI II 536 | Protein | 7e-57 | 44 |
| orfA | CAE85182.1 | OrfA protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 7e-57 | 44 |
| y1094 | CAC43410.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 7e-57 | 44 |
| y1093 | YP_002346890.1 | transposase for insertion sequence IS100 | Not tested | HPI | Protein | 7e-57 | 44 |
| unnamed | CAB46599.1 | IS100 transposase | Not tested | HPI | Protein | 5e-57 | 44 |
| y2411 | NP_669718.1 | transposase | Not tested | HPI | Protein | 7e-57 | 44 |
| api83 | CAF28557.1 | transposase | Not tested | YAPI | Protein | 5e-57 | 44 |
| YPTB1585 | YP_070113.1 | transposase | Not tested | HPI | Protein | 7e-57 | 44 |
| unnamed | CAA21403.1 | - | Not tested | HPI | Protein | 7e-57 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ser39006_3756 | YP_008524138.1 | Integrase catalytic region | VFG1626 | Protein | 4e-57 | 44 |
| Ser39006_3756 | YP_008524138.1 | Integrase catalytic region | VFG1607 | Protein | 4e-57 | 44 |
| Ser39006_3756 | YP_008524138.1 | Integrase catalytic region | VFG1461 | Protein | 2e-56 | 44 |
| Ser39006_3756 | YP_008524138.1 | Integrase catalytic region | VFG1514 | Protein | 4e-57 | 44 |
