Gene Information

Name : Ser39006_3655 (Ser39006_3655)
Accession : YP_008524037.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : ABC-type transporter, integral membrane subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4088087 - 4089166 bp
Length : 1080 bp
Strand : +
Note : PFAM: ABC-type transporter, integral membrane subunit; KEGG: transport system permease protein

DNA sequence :
ATGAGTGTAACTATCGAACCCAATATCAGCGGTATTCATACTGGCAACAGCGTGATAAATAGCTATCGACACATTATCCG
TCACCGACTGATATTGCTGACGATTATACTGGCAGCGATTATCGGATCACTATTGCTGGATTTTGTAATGGGGCCATCAG
GGCTCTCGCTTGACGTACTGTGGCAAACGCTGACTCATCCGGCTAACGCTGATGCCAGCACTCGGGTGATTGTCTGGGAT
ATCCGTCTGCCATATGCGCTAATGGCCGTTACCGTTGGTTTGGCGCTGGGATTGGCTGGTGCGGAAATGCAAACTATTCT
GAACAACCCGCTGGCCAGTCCATTTACTCTCGGCGTGTCTTCTGCCGCAGCATTTGGTGCGGCACTGGCAATTGTGCTAG
GTATTGGTATTCCCGGTATTCCGGCGCAATGGTTTATCTCCGCGAATGCGTTTCTGTTTGCCTTGTTGGCTGCCCTACTG
CTTGACGGTGTTACTCGCTGGACACAGGTAGCCACATCCGGCGTAATATTATTCGGTATCGCCCTGGTGTTTACCTTTAA
TGCACTGGTTTCCATGCTGCAATTCGTCGCCAACGAAGATACCCTGCAAGGCCTGGTGTTCTGGACTATGGGCAGTCTGG
CCCGATCATCCTGGCAAAAACTGGGTATTTTGCTACTGGCATTGGCCATTATCATGCCGCTTTCCATGATGAGTTCATGG
AAACTGACCGCATTACGACTGGGAGAAGACCGGGCGATCAGTTTTGGTATTAACGTCCGACGTCTGCGCCTTTCCGCGCT
GTTGCGTATCAGTTTTCTGTCAGCACTGTCAGTCGCATTTGTTGGCCCTATTGGCTTTATTGGGTTGGTTGCTCCCCATA
TCGCCCGCATGGTTTTCGGTGAAGATCACCGTTTTTATTTGCCAGCCAGTGCACTGATCGGTGCGTTAGTGCTCTCCCTT
GCTTCTATTGCGTCCAAGAATCTGCTCCCCGGGGCCATCATCCCAGTCGGCATCGTCACATCACTGGTAGGGGTTCCCTT
CTTTCTAAGTATTATCCTGCGCCACCGGGGGAATGTATGA

Protein sequence :
MSVTIEPNISGIHTGNSVINSYRHIIRHRLILLTIILAAIIGSLLLDFVMGPSGLSLDVLWQTLTHPANADASTRVIVWD
IRLPYALMAVTVGLALGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVLGIGIPGIPAQWFISANAFLFALLAALL
LDGVTRWTQVATSGVILFGIALVFTFNALVSMLQFVANEDTLQGLVFWTMGSLARSSWQKLGILLLALAIIMPLSMMSSW
KLTALRLGEDRAISFGINVRRLRLSALLRISFLSALSVAFVGPIGFIGLVAPHIARMVFGEDHRFYLPASALIGALVLSL
ASIASKNLLPGAIIPVGIVTSLVGVPFFLSIILRHRGNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67369.1 putative permease Not tested PAI II CFT073 Protein 4e-81 78
irp6B NP_938505.1 membrane protein permease Irp6B Not tested Not named Protein 2e-48 46