Gene Information

Name : Ser39006_3515 (Ser39006_3515)
Accession : YP_008523897.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : PTS system Galactitol-specific IIC component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3943577 - 3944842 bp
Length : 1266 bp
Strand : +
Note : PFAM: PTS system Galactitol-specific IIC component; KEGG: PTS system, mannitol-specific EIIC component

DNA sequence :
ATGTCTTTCCTCCATTTTATTGTAAATGATGTGCTTGGCCAAGCGTCAATATTAATATCGCTCATTGCCATGATTGGGCT
TATTGCCCTTAAAAAAAGCCCGGGGCAAGTCATAACAGGGACACTGAAAACCCTGCTGGGTTTTTTAATTATACTTGCTG
GTGCCAATATCATTGTTAATGCGCTTAATTTTCTGGGTGAAATATTCCAGAAGGGATTCAACATGCGCGGCGTTGTTACC
GATGTCGGGTCGATTGCCGGTATTGCACAACAAACTCTCGGGCGTGAAACCGCATTGATTATGGTTTTGGCTTTCATAGT
AAATATATTAATCGCCAGATTCACAAGATTTAAATATATATTTCTGACCGGTCAGGCTTCGCTTTGGATGGCAACCGTCT
GCTCCGTGATTGGCTACATGGGGGGATTACGCGGCACAGAGCTTATTATCATCGGCGGTGTAATTGCTGGCACAATGGCC
GTCGGTATGCCCGTACTGGCGCAACCTATCGTGCGGAAAATAACCGGGTCGGATGATTTTGCGCTTGGTCATTTCTGTAC
TATCGGCTACATCATTCAGGCCGGGGTCGCCAAACTGACCGGGAATGCTGAAAAGAGTACGGAAGATTTTGAACTTCCCC
AGGCATTTTCCTTCTTGCAGGATACCTATCTTTCGATGATGGTGGTGATGATCCCGATCTATATCATCCCGGCCATCGCC
GCAGGTCCGGTCGTGATTGCGCCTTTCGCTAATAACGTCAATTATCTGGTCTATTCTTTCCTGCAATCCGTGCAGTTTGT
GGTCGGTGTTTATGTCCTGCTGTCGGGTGTCAGGTTATTGCTGGCTGAAATAGTACCCGCGTTTCGCGGCATCGCCCTTC
GAATCGTGCCTAACGCGATTCCGGCACTCGATTGCCCGGTATTATTCCCCTATGCCCCTAACGCCGTAATCATCGGTTTT
ATCTCCACCACTATTGGATCAATTATCGGTATGTTCTTCTTCCCGGTTATCGGCCTGGCTATGATTTTACCGGGCATGTT
GACCAACTTCTTTGCGGGCGGCACCGCGGGAATATTTGCCAATGCAGTGGGTGGGCGCCGGGGGGCGATTATCGGCGGTA
TCTTCCACGGGCTGTTCATTACGCTATTGCCCGCCCTGCTTCTGCCACTGCTTGGCAAGTTCGGGCTATCCAATGTGACG
TTCAGTGACTCCGATGTCATCAGCGTCGGCCTGATATTCGGCCATATTCTTAACCTATTCCATTAA

Protein sequence :
MSFLHFIVNDVLGQASILISLIAMIGLIALKKSPGQVITGTLKTLLGFLIILAGANIIVNALNFLGEIFQKGFNMRGVVT
DVGSIAGIAQQTLGRETALIMVLAFIVNILIARFTRFKYIFLTGQASLWMATVCSVIGYMGGLRGTELIIIGGVIAGTMA
VGMPVLAQPIVRKITGSDDFALGHFCTIGYIIQAGVAKLTGNAEKSTEDFELPQAFSFLQDTYLSMMVVMIPIYIIPAIA
AGPVVIAPFANNVNYLVYSFLQSVQFVVGVYVLLSGVRLLLAEIVPAFRGIALRIVPNAIPALDCPVLFPYAPNAVIIGF
ISTTIGSIIGMFFFPVIGLAMILPGMLTNFFAGGTAGIFANAVGGRRGAIIGGIFHGLFITLLPALLLPLLGKFGLSNVT
FSDSDVISVGLIFGHILNLFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 2e-67 45
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 2e-67 45
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 2e-67 45