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Name : Ser39006_3464 (Ser39006_3464) Accession : YP_008523846.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 3884446 - 3885942 bp Length : 1497 bp Strand : - Note : TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: outE, general secretion pathway protein E; SMART: AAA ATPase DNA sequence : ATGAGCGAATCGCTTATCGACGCTGTCGAGTCACGTCCTCTGCTGCCATTCGCCTATGCGCGAGCCCAACAGATTCTGCT GTTACAGGGTGAGCTAACCTCGGTTGCACAGGTTCTCTGTGTACCGCAAACATCGGCGATGGCGCTTCTGGAAGCGCGGC GCGTGGCAGGAGTACCGCTAAATATCAGTCGGGTGAGTGCCGAAGCGTTTACGCGAGAGCTGGTGATGCGCTATCAGCGC GATTCAGAAGAAGCGCGGCAACTGATGGAAGACATCGGTAACGATATTGATTTCTATACATTGGCGGAAGAGCTGCCCAA TAGCGATGATCTGTTGGATGCTGAAGATGATGCGCCAATTATCCGCCTGATTAATGCCATGCTGACGGAAGCCATCAAAA ACAAGGCATCCGATATTCATATTGAAACCTACGAACGTAATCTGCTGATTCGTTTTCGTGTCGATGGTGTATTGCGGGAA ATTTTGCGGCCGCAGCGCCAGCTGGCATCGTTGCTGGTTTCGCGTATCAAGGTTATGGCCAAACTGGATATCGCCGAGAA ACGTGTCCCGCAGGATGGTCGTATGGCATTACGCATTGGTGGCCGTGCCATTGATGTGCGGGTTTCAACATTGCCATCAA ACCATGGTGAGCGGGTGGTGTTGCGTCTGTTGGACAAAAACAGTGTGCAGCTGGACCTGGATGCACTCGGTATGACAGAG AACAACCAGAAGCAGTTGGACACGCTGATTCACCGGCCACATGGCATCATCCTGGTGACCGGGCCGACCGGCTCGGGGAA AAGTACCACGCTTTACGCTGCGCTCAGCCGCCTTAATGCCACCGAGCGCAACATCATGACGGTGGAAGACCCGATTGAAT ATGAATTGGATGGTATCGGCCAGACGCAGGTGAATACCAAAGTGGATATGACATTTGCCCGTGGGTTGAGGGCCATTCTG CGCCAGGACCCGGATGTCGTGTTGGTTGGAGAAATTCGTGATAGCGAAACAGCACAAATTGCGGTGCAGGCATCCCTGAC CGGTCATCTGGTGTTATCCACACTGCATACCAACAGTGCGTTGGGTGCGCTGTCGCGCCTGAAGGATATGGGCACCGAAC CTTTTTTGCTGTCTACCTCTCTGCTGGCGGTGTTGGCCCAGCGGTTGGTGCGTACCCTGTGTCCGGAGTGCCGTCAGCCT TATGCGATTGATGAAGAGCAAGCCCATCAGTCCGGTCTGCCTGTCGGTACGACATTGCATCATTCGGTGGGCTGTGAGCA GTGCAACTTCACTGGCTATCGCGGCCGTACCAGCATCCATGAACTGTTGTTGATTGATGACCGGGTCCGGACGGCTATCC ATCGTGGTGACGGCGAATTGGATATTGCCCGTATGCTGGGCCATAACCGCACCACTATTCGTCAGGATGGAATGGAAAAA GTATTGGCCGGTATCACTACCTGGGAGGAAGTGGTGCGGGTGACCAAAGAGGAATGA Protein sequence : MSESLIDAVESRPLLPFAYARAQQILLLQGELTSVAQVLCVPQTSAMALLEARRVAGVPLNISRVSAEAFTRELVMRYQR DSEEARQLMEDIGNDIDFYTLAEELPNSDDLLDAEDDAPIIRLINAMLTEAIKNKASDIHIETYERNLLIRFRVDGVLRE ILRPQRQLASLLVSRIKVMAKLDIAEKRVPQDGRMALRIGGRAIDVRVSTLPSNHGERVVLRLLDKNSVQLDLDALGMTE NNQKQLDTLIHRPHGIILVTGPTGSGKSTTLYAALSRLNATERNIMTVEDPIEYELDGIGQTQVNTKVDMTFARGLRAIL RQDPDVVLVGEIRDSETAQIAVQASLTGHLVLSTLHTNSALGALSRLKDMGTEPFLLSTSLLAVLAQRLVRTLCPECRQP YAIDEEQAHQSGLPVGTTLHHSVGCEQCNFTGYRGRTSIHELLLIDDRVRTAIHRGDGELDIARMLGHNRTTIRQDGMEK VLAGITTWEEVVRVTKEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-142 | 62 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-142 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ser39006_3464 | YP_008523846.1 | general secretory pathway protein E | VFG2048 | Protein | 7e-143 | 61 |
| Ser39006_3464 | YP_008523846.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-143 | 61 |
| Ser39006_3464 | YP_008523846.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-129 | 55 |
| Ser39006_3464 | YP_008523846.1 | general secretory pathway protein E | VFG2426 | Protein | 8e-77 | 47 |
| Ser39006_3464 | YP_008523846.1 | general secretory pathway protein E | VFG0112 | Protein | 2e-84 | 47 |
| Ser39006_3464 | YP_008523846.1 | general secretory pathway protein E | VFG0233 | Protein | 3e-83 | 46 |
