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Name : Ser39006_3463 (Ser39006_3463) Accession : YP_008523845.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 3883218 - 3884444 bp Length : 1227 bp Strand : - Note : KEGG: general secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain-containing protein DNA sequence : ATGGCGCTATTTCAGTATCAGGCGTTGAACGCGCAGGGGAAAAAATGCCGTGGCTTACAGGAGGCCGACTCCGCTCGTCA GGCGCGGCAGCTTTTACGTGAAAAGGGACTGACGCCGTTGAAAATGGATGAGCAACGTGGTGAAACGACGGCGCAAAAAG GTTTTGGGTTGTCATTACGACGCGCTCACCGTATCAGCTCGGGTGACCTGGCATTGCTGACCCGACAACTGGCAACCTTG GTTGCCGCGGCGTTACCGTTGGAAGAGGCGTTAGATGCGGTTTCGAAGCAGAGTGAAAAACCGAAGCTGAGCCAGTTGAT GTCATCGGTTCGGATGAAGGTCATGGAAGGACATTCGCTGGCTGAGGCCATGAGCAGCTTCCCCGGCAGTTTTGAGCGAT TGTATTGTGCCATGGTGTCAGCCGGAGAGGCCTCCGGTCATCTTGATGCGGTGCTTAATCGTCTGGCTGATTACACCGAA CAGCGCCAGCAGATGCGTGGGCGTATTCAGCAGGCGATGATTTACCCTTGCGTGCTGACGGTGGTAGCCATTGCGGTGGT GAGTATTTTGCTAACGGCAGTCGTGCCTAAGGTAGTGGAGCAGTTTATTCACATGAAACAGGCATTGCCATTGTCAACCC GCTTGTTGATGGGGATAAGCGATGGAGCACGCACCTTCGGGCCCTGGGTGGTGTTGGCTATGGTACTCGGCATTATGGGG CTACGGGTGTTGTTACGTCAGGAACAGCGGCGTATTGCCTTTCATCACCGCCTACTGTTTTTACCGCTGATTGGACGTAT TGTGCGGGGCCTGAATACCGCCCGTTATGCCAGAACCCTGAGCATTCTCAATGCCAGTGCAGTGCCACTGTTACAGGCGA TGCGCATCAGCGGTGATGTGATGACCAACGATTACGCTCGCTTTCGGCTGAGTCAGGCGACCGATGCGGTACGCGAGGGC GTCAGTTTGCATCGGGCGCTGGAGAAGACGGCGCTGTTTCCCGCCATGATGCGCCACATGATTGCCAGCGGAGAACGCAG CGGTGAACTGGATAGCATGCTCACTCGTGCCGCCGACAACCAGGACCGTGAGTTCAATGCGGAAATGACGTTGGCACTGG GGCTGTTTGAGCCGTTGCTGGTGGTCAGCATGGCTGGGATCGTGTTGTTTATCGTTTTGGCTATTTTACAGCCGATTCTG CAACTGAATACCCTAATGAGCATGTAG Protein sequence : MALFQYQALNAQGKKCRGLQEADSARQARQLLREKGLTPLKMDEQRGETTAQKGFGLSLRRAHRISSGDLALLTRQLATL VAAALPLEEALDAVSKQSEKPKLSQLMSSVRMKVMEGHSLAEAMSSFPGSFERLYCAMVSAGEASGHLDAVLNRLADYTE QRQQMRGRIQQAMIYPCVLTVVAIAVVSILLTAVVPKVVEQFIHMKQALPLSTRLLMGISDGARTFGPWVVLAMVLGIMG LRVLLRQEQRRIAFHHRLLFLPLIGRIVRGLNTARYARTLSILNASAVPLLQAMRISGDVMTNDYARFRLSQATDAVREG VSLHRALEKTALFPAMMRHMIASGERSGELDSMLTRAADNQDREFNAEMTLALGLFEPLLVVSMAGIVLFIVLAILQPIL QLNTLMSM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-85 | 54 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-84 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ser39006_3463 | YP_008523845.1 | general secretion pathway protein F | VFG2049 | Protein | 6e-82 | 53 |
| Ser39006_3463 | YP_008523845.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-83 | 51 |
| Ser39006_3463 | YP_008523845.1 | general secretion pathway protein F | VFG1870 | Protein | 5e-68 | 43 |
