Gene Information

Name : Ser39006_3455 (Ser39006_3455)
Accession : YP_008523837.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : Prepilin peptidase
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.23.43
Position : 3877442 - 3878296 bp
Length : 855 bp
Strand : -
Note : KEGG: Prepilin peptidase; PFAM: peptidase A24A domain protein, peptidase A24A prepilin type IV

DNA sequence : 
ATGATGGATCTAAATACATTTGCCACTGTATTTCCGTGGACATGGCAGGCCGCTCTGTTTGTGTGCGGATTATTGATTGG
CAGTTTTCTCAATGTGGTCATCCATCGCTTGCCAATTATGCTGGAGCGTCGCTGGCAGCAGGAAGCCTGTTTTCATCTTG
GTCTGGCTGAACCAGAGCCCGTTTCTCGCTATGATCTCTGGTGGCCGCCCTCTACCTGCCCTGATTGCCAGCAACCGCTG
CGTTTCAGAGATAACGTTCCTGTACTGAGCTGGCTGTGGTTGCGTGGGCGCTCTCACTGTTGTCTCCGACCTATTTCCTG
GCGCTATCCGCTGATTGAAGTGTGTACCGCGCTGCTATTTGTACTGGCTGGCAGTTGGTGGGCACCGGGATTGGCGTTAC
TGGGAGGACTGGTACTATTCTGCTTCCTGTTAGTGCTGGCGGTGATTGATATCCGAACCCAATGGTTACCGGATGTGTTG
ACGTTACCGTTGCTGTGGCTGGGGCTTCTGTTTAATCTGTTTGAAACCTTTGTGCCCTTGGGTCAGGCAGTAGTGGGTGC
AATGGCGGGTTATCTTTCACTGTGGTTGATTTATTGGCTGTTTAAACGCTTCACGGGGAGAGACGCTCTGGGATACGGTG
ATTTCAAGTTCCTGGCCGCACTGGGTGCCTGGGTGGGATGGTCGGCATTACCAAACCTGGTGCTGATCGCTTCATCACTG
GGATTATTACTGACGCTGTTGTGGCGTGGTGCTCGGCGGCAGAATATACAGCAGCCGCTGGCGTTTGGCCCCTGGCTGGC
GCTGGGTGGCGGCATCAGTTTGGTACTGAATGCCGTTAGTGGATTGAGTGGGTAA

Protein sequence : 
MMDLNTFATVFPWTWQAALFVCGLLIGSFLNVVIHRLPIMLERRWQQEACFHLGLAEPEPVSRYDLWWPPSTCPDCQQPL
RFRDNVPVLSWLWLRGRSHCCLRPISWRYPLIEVCTALLFVLAGSWWAPGLALLGGLVLFCFLLVLAVIDIRTQWLPDVL
TLPLLWLGLLFNLFETFVPLGQAVVGAMAGYLSLWLIYWLFKRFTGRDALGYGDFKFLAALGAWVGWSALPNLVLIASSL
GLLLTLLWRGARRQNIQQPLAFGPWLALGGGISLVLNAVSGLSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 1e-16 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_3455 YP_008523837.1 Prepilin peptidase VFG2428 Protein 6e-30 49
Ser39006_3455 YP_008523837.1 Prepilin peptidase VFG0234 Protein 6e-27 47
Ser39006_3455 YP_008523837.1 Prepilin peptidase VFG0114 Protein 2e-31 47