Gene Information

Name : Ser39006_3435 (Ser39006_3435)
Accession : YP_008523817.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3859727 - 3861115 bp
Length : 1389 bp
Strand : -
Note : PFAM: transposase IS66, Transposase IS66, predicted helix-turn-helix domain; KEGG: hypothetical protein

DNA sequence : 
ATGCCCGCCAGTGGCGCTTCGGGCGTAAAAGCGAAGCCTTCCAGGGTGAACAGCGCGGACTGTTCGATGAAGATATCGCG
GCTGATGCCGCCGATATTGAACAACAGTTGGCCACGTTATTACCCGAACCTGAAAGCCGACAAACCCGCCGTGCCCACAC
GCCAACCGCTGCCGCCGGAACTACCACGCCAGGATATTCACCTTGCCCCGGCATCCGATAGCTGCCCGGACTGTGGCCAT
GCCCTGCGCTTTATCCGTGATGAAATCAGCGAAAGGTTGGAGTATGTGCCGGCGCGTTTTATCGTGCATCGCCATATCCG
CCCGCAGTTCAGCTGTGAACACTGCGATACCGTGGTCAGTGCTCCGCTGCCGGCACAGCTGATAGAAAAAGGCCAGCCCG
GCCCAGGGTTGCTGGCGCAGGTGGTCAGCGCCAAATGCCTCGATCATCTGCCGCTCTATCGCCAACAGGTTATCTATCAA
CGCAGCGGTGTTGATATCCCGCGCAGTACGCTGGCGGGTTGGTTCGGCGCCGTGGGCGCGGCGCTCAAACCGCTGGCCGA
GCGCCTGCATCACGACCTGCTGCAACATCCGGTGCTGCAAGCCGATGAAACCACGCTCTCTATCCTCGACCCTGGCAAAG
GCAAAACTCAACGCGGTTATCTCTGGGCCTATGTGACTACCCACAGTGCCGAGCAGGCGATAGTGCTGTATGACTGTCAG
CCGGGGCGCAGTGGTCAATATGCGCGCGACATCCTTGATGGTTGGCGCGGTACCCTGGTAGTAGATGGTTACGCCGGTTA
CCAGGCCTTGTTCGACAGCGGCCAGGCCCTGGACGCGGGCTGTTGGGCGCACGCCCGACGAAAGTTCTTTGAACTGTTTA
CCATCAATAAAAGCCCGGTGGCCAAACTGGCCCTCGACAGCATCCGTGAGTTGTACCAACTTGAGCGTAAAATCAAACAG
CGTCCGGCGGATAAAAAACGCCAATGGCGACAGCGCTATGCGAAACCTAGACTGGAGGTCTTCCATCAGTGGCTGGTGTT
GCAACAGCCGCAGGCCGCGCCCAACTCCGCGCTTCGCAAAGCGTTGGAATACATCCTGAAACGCTGGCCGGCCTTACTGC
GCTATCTGGATGACGGGCGAGTACCCATAGATAACAACCGCTGTGAAAATGTGATACGTCCGGTGGCTCTTGGGCGCAAG
AATTGGATGTTTGCCGGTTCGTTGCGTGCTGGGCAACGGATGGCGGCTATCCTGAGTCTGCTGGAAACCGCCAAACTCAA
CGGCCACGACCCGTATATCTGGTTGCGAGATGTACTGACCCGCTTGCCGACCTGGCCCAACAACCGAATCAGCGAGCTGT
TGCCCTACGCCGAAAACAGCTTCAGTTAA

Protein sequence : 
MPASGASGVKAKPSRVNSADCSMKISRLMPPILNNSWPRYYPNLKADKPAVPTRQPLPPELPRQDIHLAPASDSCPDCGH
ALRFIRDEISERLEYVPARFIVHRHIRPQFSCEHCDTVVSAPLPAQLIEKGQPGPGLLAQVVSAKCLDHLPLYRQQVIYQ
RSGVDIPRSTLAGWFGAVGAALKPLAERLHHDLLQHPVLQADETTLSILDPGKGKTQRGYLWAYVTTHSAEQAIVLYDCQ
PGRSGQYARDILDGWRGTLVVDGYAGYQALFDSGQALDAGCWAHARRKFFELFTINKSPVAKLALDSIRELYQLERKIKQ
RPADKKRQWRQRYAKPRLEVFHQWLVLQQPQAAPNSALRKALEYILKRWPALLRYLDDGRVPIDNNRCENVIRPVALGRK
NWMFAGSLRAGQRMAAILSLLETAKLNGHDPYIWLRDVLTRLPTWPNNRISELLPYAENSFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXB16 ABD94703.1 ISPpu14 transposase Orf3 Not tested ExoU island B Protein 4e-86 52
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 1e-99 50
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 2e-90 48
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-63 42
unnamed AAC31494.1 L0015 Not tested LEE Protein 5e-77 42
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 7e-77 42
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 7e-77 42
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 2e-77 42
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 3e-77 42
tnp AEA34686.1 transposase Not tested Not named Protein 1e-77 42
unnamed AAL57570.1 unknown Not tested LEE Protein 4e-77 42
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-76 41
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 4e-76 41
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 6e-77 41
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 4e-76 41
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-76 41
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-73 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_3435 YP_008523817.1 transposase IS66 VFG1700 Protein 1e-63 42
Ser39006_3435 YP_008523817.1 transposase IS66 VFG0793 Protein 3e-77 42