Gene Information

Name : Ser39006_3381 (Ser39006_3381)
Accession : YP_008523763.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : Aspartate transaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.6.1.1
Position : 3800148 - 3801362 bp
Length : 1215 bp
Strand : +
Note : KEGG: class I/II aminotransferase; PFAM: aminotransferase class I and II

DNA sequence :
ATGTCCCCGATAGAAAAATCCCAAAAGCTGGAAAATGTTTGTTATGACATTCGTGGTCCGGTACTGAAAGAAGCAAAACG
ATTGGAAGAAGAAGGAAACAAGGTACTTAAGCTCAATATCGGAAACCCGGCTCCCTTTGGCTTTGATGCGCCTGATGAAA
TTTTGGTTGATGTTATCCGTAATTTACCGACAGCCCAAGGCTACTGTGACTCAAAGGGGCTCTATTCGGCACGCAAAGCG
ATTGTGCAACATTACCAAGCTCGTGATATGCGTGATATGACCGTTGAAGATGTCTACATCGGCAATGGCGTGTCTGAGTT
AATTGTTCAATCAATGCAAGCATTATTAAATACGGGTGATGAAATGCTGGTGCCCGCACCAGACTATCCACTGTGGACGG
CAGCAGTTTCGTTATCGAGTGGCAATGCGGTTCACTATAGATGCGATGAAGCAGCAGGATGGTTCCCTGACCTGGATGAT
ATCCGCAACAAGATCACCCCCCATACCCGTGGCATAGTTATTATTAATCCCAATAATCCGACAGGAGCCGTATATAGCAA
AGCGCTACTGCTGGAAATAGTGGACATCGCCCGCCAGTATAATCTGATTATTTTTGCGGACGAGATTTACGACAAGATCC
TCTACGATGATGCTCAACATCACTCGATCGCCACACTGGCGCCGGATTTATTGACGGTTACCTTCAATGGTTTATCCAAA
ACCTATCGTGTTGCAGGATTCCGCCAGGGATGGATGGTGCTTAATGGCCCGAAAAAACACGCCCAGGGATATATTGAAGG
ATTGGAAATGCTGGCCTCGATGCGCTTGTGTGCCAATGTGCCAATGCAACATGCCATTCAGACAGCGCTGGGTGGCTACC
AAAGTATCAGCGAATTTATTCATCCCGGAGGGAGACTATATGAGCAACGCAACCGAGCCTGGGAACTTATCAACCAGATT
CCTGGCGTCTCTTGCGTAAAACCCGATGGCGCTTTGTACATGTTCCCGCGCATTGATGCCAAACGCTTTAACATCCACGA
CGATCAAAAGCTGGTTCTCGATTTACTCCTGCAAGAAAAAGTGTTGTTGGTGCAAGGCTCGGCCTTCAATTGGCCGGAAC
CGGATCATGTTCGCATTGTCACATTGCCACGAATTGATGAACTGGATATGGCGATACATAAACTGGGGCGCTTCCTGGAA
GGCTACCATCAGTAA

Protein sequence :
MSPIEKSQKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKA
IVQHYQARDMRDMTVEDVYIGNGVSELIVQSMQALLNTGDEMLVPAPDYPLWTAAVSLSSGNAVHYRCDEAAGWFPDLDD
IRNKITPHTRGIVIINPNNPTGAVYSKALLLEIVDIARQYNLIIFADEIYDKILYDDAQHHSIATLAPDLLTVTFNGLSK
TYRVAGFRQGWMVLNGPKKHAQGYIEGLEMLASMRLCANVPMQHAIQTALGGYQSISEFIHPGGRLYEQRNRAWELINQI
PGVSCVKPDGALYMFPRIDAKRFNIHDDQKLVLDLLLQEKVLLVQGSAFNWPEPDHVRIVTLPRIDELDMAIHKLGRFLE
GYHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 7e-116 62
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 7e-116 62
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 7e-116 62
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 7e-116 62