Gene Information

Name : Ser39006_3300 (Ser39006_3300)
Accession : YP_008523682.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : Iron-chelate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 3679608 - 3680420 bp
Length : 813 bp
Strand : +
Note : PFAM: ABC transporter related protein; KEGG: cbuC, ferrichrysobactin transporter, permease, ATPase; SMART: AAA ATPase

DNA sequence : 
ATGCCGCCTCTCTTGTATGCTTCAAACCTGACACTTGGGTATGACAATAAAATCATTGCGAATGACCTGAGCGTTACCAT
TCCACAAAATCTGTTCAGCGTCATCATCGGTCCCAACGCCTGCGGTAAATCGACCCTGCTGCGTGCACTGTGCCGACTGT
TAAAACCACAGGCAGGGGAAGTGTTGCTGGATGGGAAAAATATTCATCAGATCCCCACCAAAACGCTGGCACGTCAGCTT
GGTTTATTACCGCAACACACTATCGTTCCAGACAACATTACCGTGACTGATCTGGTTGCTCGTGGTCGATATCCGCATCA
GAGTCTACTCCGGCAATGGAGTCAAGCCGATAGGGAAGCGGTTGAACAGGCGATGATAGCGACAAATGTGAGTGCGCTGG
CCGAGCGCAACGTGGATGAATTATCCGGCGGGCAGCGCCAGCGAGTGTGGGTCGCCATGGTACTGGCGCAGCAGACACCG
CTGCTACTGCTGGATGAACCAACGACCTGGCTGGATATCACACACCAGATTGACTTGCTGGACTTGTTCCGCGAGCTGAA
TCAACAGCATGGACGAACACTGATCGCCGTACTGCATGATCTAAATCAGGCCTGTCGTTATGCCGACCATCTGATCGTGA
TGCACGCCGGACGCGTAATCGCCCAAGGAAAACCGACCGATATCATTAACGCGGAGTTGGTAAAAGAGGTGTTTGGCATG
TCCTGTATCATCATTGACGACCCGGTATCTCACACACCGCTTATCGTTCCATGCGGGCGCTATCACTTCGCGCCCGGCAG
TCAGCCAGACTAA

Protein sequence : 
MPPLLYASNLTLGYDNKIIANDLSVTIPQNLFSVIIGPNACGKSTLLRALCRLLKPQAGEVLLDGKNIHQIPTKTLARQL
GLLPQHTIVPDNITVTDLVARGRYPHQSLLRQWSQADREAVEQAMIATNVSALAERNVDELSGGQRQRVWVAMVLAQQTP
LLLLDEPTTWLDITHQIDLLDLFRELNQQHGRTLIAVLHDLNQACRYADHLIVMHAGRVIAQGKPTDIINAELVKEVFGM
SCIIIDDPVSHTPLIVPCGRYHFAPGSQPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-64 54
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-64 54
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-64 53
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-64 53
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-66 51
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-66 51
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-62 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-52 50
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-54 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-53 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-53 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-53 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_3300 YP_008523682.1 Iron-chelate-transporting ATPase BAC0164 Protein 8e-53 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_3300 YP_008523682.1 Iron-chelate-transporting ATPase VFG0925 Protein 3e-79 59
Ser39006_3300 YP_008523682.1 Iron-chelate-transporting ATPase VFG1042 Protein 7e-53 50