Gene Information

Name : Ser39006_3299 (Ser39006_3299)
Accession : YP_008523681.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : ABC-type transporter, integral membrane subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3678549 - 3679583 bp
Length : 1035 bp
Strand : +
Note : PFAM: ABC-type transporter, integral membrane subunit; KEGG: fepG, ferric enterobactin ABC transporter

DNA sequence :
ATGATTGCTAAAGCGCTGTATTTTAGCACGCCCCGGGACATAATCTGCGGACGCCTATCCAAACGTGTTTTATTAATTAA
CAGCCTGCTGATTCTGTTAAGCCTGCTGCTGATGACAGTGGCTATCAGCTACGGCACGTTGCAACTGTCGCCTCTACAGG
TCTGGCGAGCCTTCGCCGGTCAGGGTGAGCCAGGAATCATCACCGTGATTACTCAGTGGCGAGCACCGCGCGCCGTGATG
GCGCTGCTGTTAGGCGCAGGGTTGGGCATCAGTGGCGGCATTTTTCAGTCGATCATTCGTAACCCGCTGGGAAGTCCTGA
CGTGGTCGGCTTTAGCACCGGTGCCTATACCGGCGCACTGACGACCATTATCCTGCTCAATGGCAGCTACTATCAGATCT
CTGGCGGCGCGGTACTGGGCGGCATGATTACGGCGGTACTGGTTTATTTGCTGGCCTGGCGCGATGGCATCGTCGGTTTT
CGACTCATTATTGTCGGCATTGCCATCGGTGCCATTCTGACCGCATTCAACACCTGGCTGATCATTACCGGCTCATTGGA
ACATGCAATGACCGCTGCACTATGGGGCGCCGGGACACTGAATGGCATCACCTGGACTAAAAGCCAGCCCGCACTACTGT
TGGTACCGCTGGCAACCATCGCGGCATTGCTGATGGCAAAACGCCTTCAACTACTGGAAATGGGTGATGACAGCGCACGT
GCGCTGGGTGTCAATGCCGAAGCCAGTCGCCTGTGCCTGATGTTGTCTGGCATTATTCTGACTGCCGTAGTGACCGCCAC
CGCCGGGCCCATTTCGTTTATTGCACTTGCCTCACCACAGATTGCACGCCGCTTGACCCGCGCCAGTTCGATCCCCCTAT
TCTCGGCGGCGATGATTGGCGCCATTTTGCTGCTGAGCGCGGATATCGTGGCCCAGCATGCTTTTACCAATATGCAGCTA
CCCGTTGGGGCCGTCACCGTCAGCATCGGTGGTATTTATCTGATCTGGCTGCTGATTCGTGAATCACGCCATTAA

Protein sequence :
MIAKALYFSTPRDIICGRLSKRVLLINSLLILLSLLLMTVAISYGTLQLSPLQVWRAFAGQGEPGIITVITQWRAPRAVM
ALLLGAGLGISGGIFQSIIRNPLGSPDVVGFSTGAYTGALTTIILLNGSYYQISGGAVLGGMITAVLVYLLAWRDGIVGF
RLIIVGIAIGAILTAFNTWLIITGSLEHAMTAALWGAGTLNGITWTKSQPALLLVPLATIAALLMAKRLQLLEMGDDSAR
ALGVNAEASRLCLMLSGIILTAVVTATAGPISFIALASPQIARRLTRASSIPLFSAAMIGAILLLSADIVAQHAFTNMQL
PVGAVTVSIGGIYLIWLLIRESRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-52 49
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-53 49
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 4e-53 49
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-53 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_3299 YP_008523681.1 ABC-type transporter, integral membrane subunit VFG0928 Protein 9e-52 56