Gene Information

Name : Ser39006_3043 (Ser39006_3043)
Accession : YP_008523425.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 3372949 - 3374361 bp
Length : 1413 bp
Strand : +
Note : TIGRFAM: pyruvate kinase; KEGG: pyruvate kinase; PFAM: Pyruvate kinase barrel, Pyruvate kinase -like protein

DNA sequence : 
ATGAAAAAGACCAAAATCGTTTGTACCATTGGCCCCAAAACCGAATCAGAGGAAATGCTGGGCAAGCTGCTCAATGCCGG
CATGAATGTAATGCGCCTCAATTTTTCGCATGGTGATTATGCTGAACATGGCCAGCGTATTAAGAACCTACGGGCCATCA
CGGAAAAAACAGGTAACAAAGCCGCCATTCTACTGGATACCAAAGGTCCAGAAATCCGAACCATGAAGCTGGAGAATGGT
GCCGACGTCTCTCTGACTGCCGGCCAGATTTTCACGTTCACCACCGAGCAGAGTGTTATTGGCAACAAAGACCGTGTTGC
CGTGACCTATGCCGGATTTACCGAAGACCTGAAAACAGGTAATACCGTACTGGTTGATGACGGGCTTATCGGCATGGAAG
TGCTCGATATCAAGGGTAATGAAGTTATCTGTAAAGTACTGAACAATGGTGATCTGGGGGAAAACAAAGGCGTCAACCTG
CCAGGTGTATCTATTCAGTTACCCGCATTGGCAGAAAAGGACAAACGCGACCTGATTTTTGGCTGCGAACAAGGCGTTGA
TTTCGTTGCCGCATCGTTTATCCGTAAACGTTCTGATGTAGAAGAGATCCGAGCCCACCTGAAACAGCATGGTGGGGAAC
ATATCCAGATCATTTCTAAAATCGAAAATCAGGAAGGCCTGAACAACTTTGATGAAATTCTGGAAGCGTCCGACGGTATC
ATGGTTGCACGTGGTGATCTCGGTGTGGAAATCCCGGTAGAAGAAGTGATTTTCGCGCAAAAAATGATGATCGAAAAATG
TAACGAAACCCGTAAAGTGGTTATCACAGCAACACAAATGTTGGATTCCATGATCAAGAATCCACGCCCAACCCGTGCTG
AAGCTGGCGATGTTGCCAATGCGATTATTGATGGTACAGATGCCGTGATGCTGTCTGGAGAAAGCGCCAAGGGTAAATAC
CCTCTGGAATCAGTGACTATCATGGCAACCATCTGTGAACGTACCGATAGAGTGATGAAGCCCCGTCTGGAAAAATTGCA
CAACGAGGGCAAATTGCGCATTACGGAAGCGGTATGTCGTGGTGCAGTGGAAACCGCCGAAAAACTGGAAGCGCCATTGA
TCGTCGTTGCCACCAACGGTGGTAAATCAGCTAAATCCGTGCGTAAATACTTTCCTAACGCCCGCATTCTAGCGCTGACA
ACCAATGGAATCACCGCCCGCCAATTATTGCTGAGCAAAGGCATCGAAACTATGCTGGTGAAAGAAATTGCCTCGACTGA
TGATTTCTATCGCATTGGGAAAGAAGCGGCTCTGAGCAGCGGCTTTGCACAACCAGGCGACGTTGTCGTGATGGTTTCTG
GAGCATTGGTCCCCAGTGGCACCACCAATACCGCATCTGTGCAGCGTCTGTAA

Protein sequence : 
MKKTKIVCTIGPKTESEEMLGKLLNAGMNVMRLNFSHGDYAEHGQRIKNLRAITEKTGNKAAILLDTKGPEIRTMKLENG
ADVSLTAGQIFTFTTEQSVIGNKDRVAVTYAGFTEDLKTGNTVLVDDGLIGMEVLDIKGNEVICKVLNNGDLGENKGVNL
PGVSIQLPALAEKDKRDLIFGCEQGVDFVAASFIRKRSDVEEIRAHLKQHGGEHIQIISKIENQEGLNNFDEILEASDGI
MVARGDLGVEIPVEEVIFAQKMMIEKCNETRKVVITATQMLDSMIKNPRPTRAEAGDVANAIIDGTDAVMLSGESAKGKY
PLESVTIMATICERTDRVMKPRLEKLHNEGKLRITEAVCRGAVETAEKLEAPLIVVATNGGKSAKSVRKYFPNARILALT
TNGITARQLLLSKGIETMLVKEIASTDDFYRIGKEAALSSGFAQPGDVVVMVSGALVPSGTTNTASVQRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 0.0 86
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 0.0 86
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 0.0 85
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 0.0 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_3043 YP_008523425.1 pyruvate kinase VFG0479 Protein 0.0 86