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Name : Ser39006_2989 (Ser39006_2989) Accession : YP_008523371.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Virulence Product : sigma54 specific transcriptional activator, PspF, Fis family Function : - COG functional category : - COG ID : - EC number : - Position : 3297573 - 3298568 bp Length : 996 bp Strand : + Note : TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type; KEGG: pspF, DNA-binding transcriptional activator; SMART: AAA ATPase DNA sequence : ATGGATCATGAAAAAGAATCTTTATTGGGTGAAGCCAACAATTTTCTTGAAATGCTGGAACAGGTGTCACAACTGGCGCA GCTTAATAAACCCGTACTGGTAATTGGCGAACGCGGTACCGGTAAAGAGCTGATCGCCAGCCGACTGCACTATTTGTCTC CCCGCTGGCAAGGGCCATTCATTTCCCTTAACTGTGCGGCATTAAATGAGAACCTACTCGACTCTGAACTGTTCGGACAC GAAGCGGGTGCCTTTACTGGCGCACAAAAGCGCCATCTCGGGCGTTTCGAGCGTGCCGATGGTGGAACGTTATTCCTTGA TGAACTGGCGACTGCCCCCATGCTGGTGCAGGAAAAACTATTGCGGGTCATCGAATACGGTGTACTGGAACGCGTTGGTG GTGGACAGCCATTACAGGTGGATGTCCGGCTGGTCTGTGCGACTAACGACAATCTGCCGGTACTGGCTGAGCAAGGAAAA TTCCGTGCTGATCTGCTGGATCGTCTGGCATTTGACGTAGTGTATCTCCCCCCACTGCGCCAACGCCAGCAGGATATCAT GTTGCTGGCTCAGCATTTTGCCGTGCAGATGTGCCGTGAGTTGGGCCAATCGTTGTTCCCGGGGTTCACACCGCATGCTG AACATACCTTGTTGCACTACGCCTGGCCTGGGAATATCCGGGAATTGAAGAATGTGGTAGAACGGTCGGTGTATCGCCAC GCCAGCAGCGCGACAGCGCTGGATAATATTATTATTGATCCATTCCAAAAAGATGCTCCAATACTACCGGACCTTATCGC CACCCCCAGCGATGCCCTTCCCGATTTACCGCTGGATATGCGTCGCTGGCAGCGGGATCAGGAAAAACATCTGCTGGAGC AATCACTGACGCAGGCACGTTTCAATCAGCGCAAAGCCGCGGAACTCCTGGGATTGACCTACCATCAGTTCCGCGGTTTG TTGAAAAAACATGAATTATCCGTGAGTAATGAATAG Protein sequence : MDHEKESLLGEANNFLEMLEQVSQLAQLNKPVLVIGERGTGKELIASRLHYLSPRWQGPFISLNCAALNENLLDSELFGH EAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGVLERVGGGQPLQVDVRLVCATNDNLPVLAEQGK FRADLLDRLAFDVVYLPPLRQRQQDIMLLAQHFAVQMCRELGQSLFPGFTPHAEHTLLHYAWPGNIRELKNVVERSVYRH ASSATALDNIIIDPFQKDAPILPDLIATPSDALPDLPLDMRRWQRDQEKHLLEQSLTQARFNQRKAAELLGLTYHQFRGL LKKHELSVSNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96283.1 | HrpS/HrpR-like protein | Not tested | S-PAI | Protein | 5e-35 | 43 |
| unnamed | AAT96324.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 5e-35 | 43 |
| unnamed | AAT96363.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 4e-35 | 43 |
| hrpRS | ABA47311.1 | HrpRS | Virulence | S-PAI | Protein | 1e-33 | 42 |
