|
Name : Ser39006_2922 (Ser39006_2922) Accession : YP_008523304.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Virulence Product : type III secretion protein, YscU/HrpY family Function : - COG functional category : - COG ID : - EC number : - Position : 3216933 - 3218015 bp Length : 1083 bp Strand : + Note : KEGG: hrcU, type III secretion inner membrane protein; TIGRFAM: type III secretion protein, YscU/HrpY family; PFAM: type III secretion exporter DNA sequence : GTGAGCGAAAAAACCGAAAAACCCACGACCAAAAAATTACAGGATGCGCGGCGCAAAGGGGAAGTTGGCCAAAGCCAGGA TGTACCAAAATTACTGATTTGCACCAGTCTGCTGGAAACTATTCTGGCGCTGGCAGACCGCAGCATGGGAAAATTGCAGT CATTGATGCAACTCCCTCTGGCACGTCTGAGTGACCCATTCGGCCATGCGGCAGAAGAAATTTTCAGTGAAGCGTTATCC CTGCTTGCTACGTTTTGCCTGCTTACCATCAGTGTGGCAGTGCTGTTACGTCTGGTCGGCGGGTGGCTCCAGTATGGCCC GCTGTTTGCGCCGGAAGCACTGCGCATTGACCTTAGTCGACTGAATCCCATCAACCAGTTCAAACAGATGTTCTCCATGC GAAAACTGACGGAGATGCTGACCAACATTCTAAAAGCGAGCACCATCGGCACGATATTTTATCTGGTCATTATCCCCGAT CTGGAGTCGCTGGCGGAGCTGTCTTACGGTGACCTGGACGGATTCTGGCACGGTGTGGCGAAAATATTACACCATAGTGC ACGCACCACCCTGACGGCACTGCTGGTATTGTCCGCTCTGGATTTTGGCCTGCAAAAATATTTTTTTATGAAACAACAAC GTATGAGTCATGAAGATCTCCGTAGTGAGCATAAAGATTCCGAAGGTGATCCGCACATGAAAGGACATCGTAAGTCACTG GCGAATGAGATATTGAATAAACCGGCCACCCAGCGCCCCAAAGGCAAAGTTGAAGATGCGGACCTGCTGCTGGTTAACCC TACGCACTATGCGGTGGCGCTGTTTTATCGTCCGGGAAAAACACCGTTGCCACGCATTCTATGTAAAGGGAAAGATGATC AGGCGAAGAAACTGATCACCCGCGCCCATCAAGCCGATATTCCGGTGATCCGTTTTGTATGGCTGGCCCGAACGCTTTAC CGTATTCCGACCGGCAACTACATTCCTCGTGATACCTTGCAGGCAGTCGCACAGGTTTATCGGATATTACGTCAGTTGGA ACAGGAGCAGAAAAGGGAAAAGGAAATTATTGAAATCGAGTAA Protein sequence : MSEKTEKPTTKKLQDARRKGEVGQSQDVPKLLICTSLLETILALADRSMGKLQSLMQLPLARLSDPFGHAAEEIFSEALS LLATFCLLTISVAVLLRLVGGWLQYGPLFAPEALRIDLSRLNPINQFKQMFSMRKLTEMLTNILKASTIGTIFYLVIIPD LESLAELSYGDLDGFWHGVAKILHHSARTTLTALLVLSALDFGLQKYFFMKQQRMSHEDLRSEHKDSEGDPHMKGHRKSL ANEILNKPATQRPKGKVEDADLLLVNPTHYAVALFYRPGKTPLPRILCKGKDDQAKKLITRAHQADIPVIRFVWLARTLY RIPTGNYIPRDTLQAVAQVYRILRQLEQEQKREKEIIEIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | AAB06008.1 | HrcU | Virulence | Hrp PAI | Protein | 3e-117 | 70 |
| hrcU | ABA47282.1 | HrcU | Virulence | S-PAI | Protein | 5e-92 | 58 |
| hrcU | AAT96346.1 | HrcU | Virulence | S-PAI | Protein | 2e-90 | 58 |
| hrcU | AAT96306.1 | HrcU | Virulence | S-PAI | Protein | 7e-93 | 58 |
| hrcU | AAT96265.1 | HrcU | Virulence | S-PAI | Protein | 5e-93 | 58 |
| hrcU | AAT96203.1 | HrcU | Virulence | T-PAI | Protein | 2e-84 | 53 |
| hrcU | AAT96149.1 | HrcU | Virulence | T-PAI | Protein | 2e-84 | 53 |
| hrcU | ABQ88362.1 | HrcU | Virulence | Hrp PAI | Protein | 5e-82 | 52 |
| hrpY | AAB05078.1 | HrpY | Virulence | Hrp PAI | Protein | 5e-82 | 52 |
| hrcU | NP_791219.1 | type III secretion protein HrcU | Virulence | Hrp PAI | Protein | 2e-77 | 51 |
| hrcU | AAG33887.1 | HrcU | Virulence | Hrp PAI | Protein | 2e-65 | 50 |
| hrcU | AAC35808.1 | hrp type III pathway protein | Virulence | Hrp PAI | Protein | 2e-69 | 50 |
