Gene Information

Name : Ser39006_2906 (Ser39006_2906)
Accession : YP_008523288.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : Type III secretion, needle-protein like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3202343 - 3202708 bp
Length : 366 bp
Strand : -
Note : PFAM: Type III secretion, needle-protein like protein; KEGG: hrpB, HrpB protein

DNA sequence :
ATGATGAAAATCACACATGTCAATGCATTCAAGGGAGTGATAAATGACGGTGAACCGCGCAGTCTGGATGTTCCGGCATC
GGCTGATGTGAATTGGTTCAGTGCGGCATTGAACCCGATATCAAACGTTATGCCATCTGCTGATGATAAATCCTGGGTAA
ACACGCTGGTTGAAAAATCCAATCATCTGGATAACTTGCTGGAACACGCCGAGCGTCAGGTCGGAAAGAGTGTCAGTACC
AACAATCCGAAAGATGTTATGGATGCCACCCGAACGCTGTCCTCTTTCTATCTGGAAAGTCTGATGAACGCGAAGGTGGT
GGCGAAAAGCGTGCAGAGTCTGGAAAAACTGACCAACTTACAATAG

Protein sequence :
MMKITHVNAFKGVINDGEPRSLDVPASADVNWFSAALNPISNVMPSADDKSWVNTLVEKSNHLDNLLEHAERQVGKSVST
NNPKDVMDATRTLSSFYLESLMNAKVVAKSVQSLEKLTNLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB AAB49173.1 HrpB Virulence Hrp PAI Protein 2e-17 45