|
Name : Ser39006_2905 (Ser39006_2905) Accession : YP_008523287.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Virulence Product : type III secretion apparatus lipoprotein, YscJ/HrcJ family Function : - COG functional category : - COG ID : - EC number : - Position : 3201554 - 3202333 bp Length : 780 bp Strand : - Note : KEGG: type III secretion apparatus lipoprotein, YscJ/HrcJ family; TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein DNA sequence : ATGAGTAAATCCGTTCTGAATCGATGCCTTATCCTGCTGCTGACCCTGATACTGGCTGGCTGTGGTGACCAGGTGGAACT ACACCGCGGCCTGTCTGAAAACGATGCCAATGAAGTGATTGCCGCGCTGGGGGGGTATCACATCGAGGCAGAAAAACGCC TGGATAAAACCGGCGTCACCATTCTTCTTGATAAAAAAGACATTGATCGAGCAGTAAATATCCTGAGTGCCGCCGGATTA CCTCGCCAGGCCAGAACCAATCTGGGGGAAGTGTTCCAGAAAAGTGGGGTGATTTCGACGCCATTGGAAGAACGCGCCCG TTATATCTATGCATTGTCTCAGGAAGTGGAATCCACACTGACACAGATTGACGGTGTTCTCGTCGCTCGTGTGCATGTGG TACTTCCAGAGCGTATTGCACCGGGAGAGCCTATCCAACCGGCGTCCGCTGCCGTGTTTATCAAGTATCGTCCTGAGCTG GAGCCCGACAGCATTGAGCCGCGTATTCGTCGGATGGTGGCCAGCAGTATCCCCGGCTTGGCCGGAAAAAGTGATAAGGA TTTAGCCATCGTGTTCGTTCCTGCCGAGCCGTACATCGATCATATTCCCATGATATCTCTCGGCCCATTTCAGTTTACCC CGCAAGAGATGGCGCAATTGCAGTGGGTAGTCACCCTGTTGATCCTGTCCGTCATTGGCGCATTGGGCTGGTTGATTGGT AAACCCTGGTGGATTCAGCATCAGGAACAGAAAAAATCGACCCCACCACAGGGAGTGTAA Protein sequence : MSKSVLNRCLILLLTLILAGCGDQVELHRGLSENDANEVIAALGGYHIEAEKRLDKTGVTILLDKKDIDRAVNILSAAGL PRQARTNLGEVFQKSGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAPGEPIQPASAAVFIKYRPEL EPDSIEPRIRRMVASSIPGLAGKSDKDLAIVFVPAEPYIDHIPMISLGPFQFTPQEMAQLQWVVTLLILSVIGALGWLIG KPWWIQHQEQKKSTPPQGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 6e-76 | 75 |
| hrcJ | AAT96279.1 | HrcJ | Virulence | S-PAI | Protein | 4e-64 | 67 |
| hrcJ | AAT96320.1 | HrcJ | Virulence | S-PAI | Protein | 4e-64 | 67 |
| hrcJ | AAT96359.1 | HrcJ | Virulence | S-PAI | Protein | 1e-63 | 66 |
| hrcJ | ABA47308.1 | HrcJ | Virulence | S-PAI | Protein | 1e-64 | 64 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 2e-57 | 61 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 1e-57 | 59 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 3e-55 | 59 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 3e-55 | 59 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 1e-56 | 57 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 2e-56 | 57 |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 1e-28 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ser39006_2905 | YP_008523287.1 | type III secretion apparatus lipoprotein, YscJ/HrcJ family | VFG0218 | Protein | 4e-29 | 44 |
