Gene Information

Name : Ser39006_0282 (Ser39006_0282)
Accession : YP_008520664.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 309746 - 310906 bp
Length : 1161 bp
Strand : -
Note : KEGG: O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence :
ATGACGCGTAAACAGGCTACTATCACAGTTCGTAGTGGGTTAAATAATGACGAGCAGTTTGGTTGTGTCGTTCCTCCCAT
TCACCTTTCCAGCACTTACAATTTTACCGGTTTTAATCAGCCTCGAGCGCATGACTACTCTCGTCGGGGGAACCCAACGC
GTGATGTTGTGCAGCGGGCGTTGGCAGAACTGGAAGGGGGGGCCGGTTCTGTGATGACGAACACCGGTATGTCGGCGATT
TTTCTGGTCTGTACGGTATTTTTACGCCCCGGCGACCTGCTGGTGGCTCCTCATGATTGTTATGGCGGTAGTTACCGGCT
GTTTGAAAGTCTGAGCAAGCGGGGGGTATTCCGCGTGAAATTTGTCGATCAGGGTGATGATTCGGCGCTGAAGTCTGCTT
TGGCCGAAAAACCGAAGCTGGTGCTGGTGGAGAGCCCCAGTAATCCACTGCTGCGTGTGGTGGATATTGCGGCCATTTGT
CAGTCGGCGCGTGAAGCGGGTGCTGTCAGTGTAGTGGATAACACTTTCCTCAGTCCGGTGTTGCAAAATCCACTGCAATT
GGGTGCCGATCTGGTGATTCATTCTTGTACCAAGTATTTGAACGGGCACTCTGACGTTGTTGCTGGAGCGGTGATTGCCA
AGGACCCTGAAGTGGCTACCGAACTGGCGTGGTGGGCGAATAATATCGGTGTTACCGGTGCGGCGTTTGATAGTTACCTG
CTATTGCGCGGTTTGCGCACGTTGTCGCCGCGTATGGCCGCAGCCCAGAAAAATGCGCAACAAATTGTGGCGTATTTGCA
GGATCAACCGTTAGTGAAAAAGCTGTATTATCCCTCTCTGCCGCAACACCCTGGACACGACATCGCCTGCCGTCAACAGT
CCGGCTTTGGCGCGATGTTAAGTTTTGAACTGGATGGTGAGGAAGACGCTTTGCGCCGTTTCCTCTCATCGTTGGAGTTG
TTTACGTTGGCGGAATCGTTGGGGGGTGTTGAAAGCCTGATTTCTCATGCAGCTACCATGACTCATGCGGGCATGTCTCC
AGAGGCGCGTGCCGCTGCCGGGATATCAGACACACTGCTGCGCATTTCGGTAGGTATTGAAGACGGTGATGATTTGGTTG
CCGATCTGGAACAGGCGTTTCAAGCTGTAACCACGAGGTAA

Protein sequence :
MTRKQATITVRSGLNNDEQFGCVVPPIHLSSTYNFTGFNQPRAHDYSRRGNPTRDVVQRALAELEGGAGSVMTNTGMSAI
FLVCTVFLRPGDLLVAPHDCYGGSYRLFESLSKRGVFRVKFVDQGDDSALKSALAEKPKLVLVESPSNPLLRVVDIAAIC
QSAREAGAVSVVDNTFLSPVLQNPLQLGADLVIHSCTKYLNGHSDVVAGAVIAKDPEVATELAWWANNIGVTGAAFDSYL
LLRGLRTLSPRMAAAQKNAQQIVAYLQDQPLVKKLYYPSLPQHPGHDIACRQQSGFGAMLSFELDGEEDALRRFLSSLEL
FTLAESLGGVESLISHAATMTHAGMSPEARAAAGISDTLLRISVGIEDGDDLVADLEQAFQAVTTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-64 42
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-63 42