Gene Information

Name : Ser39006_2141 (Ser39006_2141)
Accession : YP_008522523.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2400028 - 2400324 bp
Length : 297 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: transposase IS3/IS911 family protein

DNA sequence : 
ATGACAAAACCAGTATCAACCAGTAAAGCGTCCCGTAAACAGTACACACCCGAATTCCGCAATGAAGCCCTGAAACTGGC
TGAACGCATCGGTGTCGCCGCCGCCCGCGAATTCAGCCTGTATGAATCCCAGCTTTATGCTTGGCGCAGCAAGCAACAGC
AACAACTGACCTCGTCTGAGCGCGAAAATGAGCTGGCAATTGAAAATGCCCGTTTGAAGCGCCAACTGGCTGAGCGTGAT
GAAGAACTGGCCATCCTCCAAAAGGCCGCGACATACTTTGCGAAGCGCCTGAAATAA

Protein sequence : 
MTKPVSTSKASRKQYTPEFRNEALKLAERIGVAAAREFSLYESQLYAWRSKQQQQLTSSERENELAIENARLKRQLAERD
EELAILQKAATYFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 3e-28 86
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 3e-28 86
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 1e-27 86
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 1e-27 86
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 3e-31 84
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 3e-31 84
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 3e-31 84
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 4e-31 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_2141 YP_008522523.1 transposase IS3/IS911 family protein VFG0603 Protein 9e-29 86
Ser39006_2141 YP_008522523.1 transposase IS3/IS911 family protein VFG1632 Protein 5e-28 86