Gene Information

Name : Ser39006_2124 (Ser39006_2124)
Accession : YP_008522506.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, LuxR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2386976 - 2387632 bp
Length : 657 bp
Strand : +
Note : KEGG: response regulator; PFAM: response regulator receiver, regulatory protein LuxR; SMART: response regulator receiver, regulatory protein LuxR

DNA sequence : 
TTGATTAGCGTTTTTCTTGTTGATGACCATGAACTGGTGCGGGCAGGGATACAGCGCATTCTCGACGATATCAAAGGCCT
TAAGGTCGTTGGTGAGGCTCAATGTGGCGAAGATGCTGTAAGATGGTGCCGCAGTAATCGTGTTGATGTCGTCTTAATGG
ATATGAATATGCCTGGGATCGGCGGCCTTGAAGCCACACGGAAAATCGTACGATTTTCTCCCGAAATAAAGGTTATAATG
CTGACTATATACACAGAGAACCCTTTGCCTGCTAAAGTTATGCAGGCTGGTGCGGCAGGCTACTTAAGTAAAGGTGCCAC
ACCTCAGGAGGTTATCTATGCGATTCGGTCCGTTCATGCCGGCAAACGTTATATCGCCTCCGATATTGCACAACAGATGG
CATTGAGTCAGTTAGAGCCACAGACCGAAACGCCTCTGGAACGCCTGTCTGAACGAGAATTGCAAATTATGCTGATGATT
ACCAAAGGGCAGAAAGTGACGGAAATTTCCGATCAACTTAATCTGAGCCCTAAAACCGTGAATAGCTATCGTTATCGAAT
GTTCAACAAGCTGAACATTAATGGTGATGTAGAGCTGACCCATCTGGCAATTCGACACGGCCTGTTTAATGCGGAGACAT
TGATTAGCAGTGAGTGA

Protein sequence : 
MISVFLVDDHELVRAGIQRILDDIKGLKVVGEAQCGEDAVRWCRSNRVDVVLMDMNMPGIGGLEATRKIVRFSPEIKVIM
LTIYTENPLPAKVMQAGAAGYLSKGATPQEVIYAIRSVHAGKRYIASDIAQQMALSQLEPQTETPLERLSERELQIMLMI
TKGQKVTEISDQLNLSPKTVNSYRYRMFNKLNINGDVELTHLAIRHGLFNAETLISSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-46 49
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-46 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_2124 YP_008522506.1 two component transcriptional regulator, LuxR family VFG1889 Protein 5e-52 50