Gene Information

Name : Ser39006_0199 (Ser39006_0199)
Accession : YP_008520581.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : Porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 203562 - 204500 bp
Length : 939 bp
Strand : +
Note : TIGRFAM: porphobilinogen deaminase; HAMAP : Porphobilinogen deaminase; KEGG: hemC, hydroxymethylbilane synthase; PFAM: Porphobilinogen deaminase domain-containing protein

DNA sequence : 
ATGTTAGACAATATTCTCAGAATCGCCACCCGACAGAGCCCACTCGCCCTATGGCAAGCTCAGTATGTCCAACATCGGCT
ACAGGCATACCATCCCGGTTTACGCGTAGATCTGGTGCCAATGATCACCCGCGGTGATGTTCTGCTGGATACACCGCTGG
CAAAAGTTGGTGGTAAAGGTTTGTTCGTCAAAGAGTTAGAATTGGCTCTGATGGAAAAACGCGCAGATATCGCCGTACAC
TCCATGAAAGATGTTCCTATTGAATTTCCTCAAGGCCTGGGTCTGGTCACGATCTGTGAACGCGAAGATCCCCGTGACGC
CTTTGTTTCCAATCACTATTCTGGTCTGACGGATTTACCCGCTGGAAGCTGCGTCGGGACATCTAGCCTGCGCCGTCAAT
GTCAGTTGCGGGCGCAGCGCCCCGATCTGACCATCCGTGATTTACGTGGCAACGTCGGCACACGGCTGGCGAAGCTTGAT
AGTGGCGAATATGACGCCATTATTCTGGCCGTCGCTGGTCTGAAACGTCTGGGGCTGGAAAATCGCATTCGTTGTGCATT
AAGCCCGGAAGAGTCGTTACCCGCGGTTGGGCAAGGTGCCGTTGGTATTGAATGTCGGTTGGATGATGAGCATACCCGCA
TGCTGCTGGCACCACTCAATCACACAGAAACGGCAATAAGGGTACAGGCTGAGCGCGCCATGAATACGCGACTGGAAGGA
GGCTGTCAGGTTCCTATTGGCAGTTACGCCGAACTGGAAGGTGAGACGCTGTGGCTACGGGCGCTGGTCGGCGCACCGGA
TGGCAGTTGCATTATCCGGAGTGAACGCCGAGGCAACTTGCAGTATGCAGAACAGATTGGCATCAATCTGGCGGAAGAGT
TGTTAGCCCGAGGTGCCAAAACCATTTTACAAGCCGTTTATGGGGACACGCCATCATGA

Protein sequence : 
MLDNILRIATRQSPLALWQAQYVQHRLQAYHPGLRVDLVPMITRGDVLLDTPLAKVGGKGLFVKELELALMEKRADIAVH
SMKDVPIEFPQGLGLVTICEREDPRDAFVSNHYSGLTDLPAGSCVGTSSLRRQCQLRAQRPDLTIRDLRGNVGTRLAKLD
SGEYDAIILAVAGLKRLGLENRIRCALSPEESLPAVGQGAVGIECRLDDEHTRMLLAPLNHTETAIRVQAERAMNTRLEG
GCQVPIGSYAELEGETLWLRALVGAPDGSCIIRSERRGNLQYAEQIGINLAEELLARGAKTILQAVYGDTPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-83 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-83 61