Gene Information

Name : Ser39006_1973 (Ser39006_1973)
Accession : YP_008522355.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : Nickel-transporting ATPase, Fe(3+)-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.30
Position : 2200596 - 2202413 bp
Length : 1818 bp
Strand : +
Note : PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter; SMART: AAA ATPase

DNA sequence :
GTGAGCCAGCCGGTGCTTAGCGTTAAACAACTCAATACGGCATTTCGCGTCAACGGCGAATGGATGAATGTGGTGCGCGA
TCTGTCGTTTGATATCGCATCAGGTGAGACTGTGGCGCTGGTGGGAGAATCCGGCTCTGGTAAAAGCGTGACCGCCATGT
CAATCATGCGGCTGCTGGCCGGTCCACAAGTCAGCGTCAGTGGTAGCATCCAGTTTGACGGACAGGCGTTATTGTCCCTG
TCTGCATCCGCCATGCAGCGAATTCGCGGTAACCATATTGGGATGGTCTTTCAGGAGCCGATGACCAGCCTTAATCCGGT
GTTGAAGATTGGTACACAGATTACCGAAGTGTTGAGACGCCATCGTGGCATGGACCGAGCCAGCGCGCAGGCGGAAGCGG
TTCGGCTGCTGGAGAAGGTGCGAATTCCGGCGGCGAAGTCGCGGCTTAACGAGTATCCGCTCAGTTTTTCCGGCGGGATG
CGCCAGCGAGTGGTGATTGCTATCGCGTTGGCGTGCCAGCCTAAACTGCTGATTGTCGATGAACCGACGACCGCACTGGA
TGTGACGATTCAGGCGCAGATTCTGTCACTGATTAAAACCCTACAGGAAGATTCCGGCATGTCGATTCTGTTCATCACCC
ATGACATGAGTGTGGTGGCGGAAGTGGCAGATAGAACCATGGTGATGTATCGGGGCGAAGGGGTGGAGATGGCTGACACC
CGGCAACTGTTCCGGCAACCGCAACATACATACAGCAAGATACTGTTTTCCGCTGTGCCACGGCTGGGCGCCATGGCCGG
TACGCGCTTACCGCAGCGCTTTGCGCTGGTTGATCCCGATCAGCCCGCGATACCAGATTGGCAAAATATTGCTGAAGATC
AGATCACCGATACCGTACAACATGGTGAGCCGATATTAGCAGTAAAGGATTTGGTGACGCGATTTGAGGTGAGATCGGGT
TGGTTGAAACGCGTTACCGGACGCGTACACGCCGTTGAAAAGGTCTCTTTTCAACTGTTTCCAGGAGAAACGTTGTCGCT
GGTAGGCGAGTCTGGTTGTGGTAAATCAACTACCGGGCGTTCTATTTTGCGTTTAACATCGCCGTGTGGCGGCACGGTGT
CTATTAACGGAAAAGATATGCTGGCGGCAGATAGCAGCGAACTGGCACGATTGCGCATGCAGGTGCAAATGATATTTCAG
GATCCTTATGAAAGCCTGAATCCGCGTCTGCGTATTGGCGAGGCAATAGCCGAACCGATGATCACTCATGGCATCATCAA
ACCCGAACAAGCAAAGAGAAGTGTGGCCGACTTATTGAAAAAAGTCGGACTGCGCGCTGATATGAGTGAACGTTTCCCTC
ATCAGTTTTCCGGGGGACAGCGCCAGCGAATTTGTATCGCCCGTGCATTGGCGTTGAACCCGAAAGTGATCATTGCCGAT
GAGTCGGTTTCTGCATTGGATATGACGGTGAAAGCGCAAATCATTAATTTGATGCTCGATCTTCAACAACAGTTGGGGTT
GGCTTATCTGTTTATTTCTCATGATATGGCGGTTGTCGAACGTATCAGCCACCGGGTCGCGGTGATGTATCAGGGGGAAA
TCGTCGAGATCGGTTCACGGCAGGCAATTTTTGATAATCCGCAACATCCCTATACTCGCCGTTTGTTGGCCGCCGTGCCG
GTTCCCGATCCTGAAAAACGGGTTAAACGTTCGCTATTCGAAGAAGAGCTGACCAGCCCACTGCGACCGGTGGATTATTG
TCCGCCCGAGCGACGTTATCATCAGTATGAAGATGGGCACTGGGTACAGGAGTCGTAA

Protein sequence :
MSQPVLSVKQLNTAFRVNGEWMNVVRDLSFDIASGETVALVGESGSGKSVTAMSIMRLLAGPQVSVSGSIQFDGQALLSL
SASAMQRIRGNHIGMVFQEPMTSLNPVLKIGTQITEVLRRHRGMDRASAQAEAVRLLEKVRIPAAKSRLNEYPLSFSGGM
RQRVVIAIALACQPKLLIVDEPTTALDVTIQAQILSLIKTLQEDSGMSILFITHDMSVVAEVADRTMVMYRGEGVEMADT
RQLFRQPQHTYSKILFSAVPRLGAMAGTRLPQRFALVDPDQPAIPDWQNIAEDQITDTVQHGEPILAVKDLVTRFEVRSG
WLKRVTGRVHAVEKVSFQLFPGETLSLVGESGCGKSTTGRSILRLTSPCGGTVSINGKDMLAADSSELARLRMQVQMIFQ
DPYESLNPRLRIGEAIAEPMITHGIIKPEQAKRSVADLLKKVGLRADMSERFPHQFSGGQRQRICIARALALNPKVIIAD
ESVSALDMTVKAQIINLMLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGSRQAIFDNPQHPYTRRLLAAVP
VPDPEKRVKRSLFEEELTSPLRPVDYCPPERRYHQYEDGHWVQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-105 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-80 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-80 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 8e-80 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-80 41