Gene Information

Name : Ser39006_1918 (Ser39006_1918)
Accession : YP_008522300.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 2127929 - 2129095 bp
Length : 1167 bp
Strand : +
Note : SMART: UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; KEGG: ugd, UDP-glucose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase , UDP-glucose/GDP-mannose dehydrogenase dimeriz

DNA sequence :
ATGAGAATAGCAATTGCGGGCACTGGCTATGTTGGCCTGTCCAATGCAATGCTGCTGGCGCAGCATAATGAAGTAGTGGC
GGTAGATATTCTCGCCGAAAAGGTCGAAATGTTGAATAAAGGCATTTCACCGATTGTAGATAAAGAAATTGAAGAGTTTC
TGTGTAATCCGTCGCTCAATTTCCGTGCAACGTTGGATGGCAAGTCTGCCTATCAGGGGGCGGATTTCGTGATTATCGCC
ACACCTACCGATTATGACCCCAAAACTAACTACTTCAATACCCGGTCGGTTGAGTCGGTGATCCGTGAGGTCACTGCCGT
CAACCCACACGCGCTGATGATCATCAAATCGACTATTCCGGTGGGATATACCCAGCAGGTACGCGAGCAGTTTGGTACGG
GAAATATCATTTTTTCACCAGAATTTCTGCGGGAAGGTCGCGCACTGTACGATAATCTGTATCCATCGCGGATTGTGGTG
GGTGAACAATCACCACGTGCGGAACAATTTGCTCAACTTTTGGTGCAGGGTGCCAGAAAAACCGATATCACGGTATTGTT
TACCGGCTCCACGGAAGCAGAAGCCATTAAGCTGTTTGCCAATACCTATCTGGCAATGCGTGTTGCCTATTTCAATGAAC
TGGATACTTACGCACAGACGTTGGGTTTGGACAGCAAACAAATCATTGAAGGGGTTGGACTGGATCCGCGAATTGGTCAG
CACTATAACAATCCCTCTTTTGGCTATGGCGGCTACTGTTTGCCGAAAGATACCAAGCAACTGCTGGCAAATTACGAGGC
TGTCCCCAATAATCTGATTCGTGCCATCGTGGATGCCAATACGACGCGTAAGGATTTTATTTCCGACTCGGTGATTAAGC
GAAACCCTAAAGTTGTAGGGGTTTACCGCCTGGTGATGAAAACCGGTTCTGATAACTTCCGTGCATCCGCTATTCAAGGG
GTAATGAAGCGTATCAAGGCAAAAGGCATCGAAATGGTAGTGTATGAGCCGGAGCTGAAAGAGACCGAGTTTTTCCGATC
GCGGGTTATCAATGATCTGGAGGAGTTTAAACAGATTTCGGACGTGATACTGTCTAATCGGATGGCATCGGAATTATCTG
ATGTTGCAGCAAAAGTCTATACACGTGATCTCTTCGGTTCCGATTAG

Protein sequence :
MRIAIAGTGYVGLSNAMLLAQHNEVVAVDILAEKVEMLNKGISPIVDKEIEEFLCNPSLNFRATLDGKSAYQGADFVIIA
TPTDYDPKTNYFNTRSVESVIREVTAVNPHALMIIKSTIPVGYTQQVREQFGTGNIIFSPEFLREGRALYDNLYPSRIVV
GEQSPRAEQFAQLLVQGARKTDITVLFTGSTEAEAIKLFANTYLAMRVAYFNELDTYAQTLGLDSKQIIEGVGLDPRIGQ
HYNNPSFGYGGYCLPKDTKQLLANYEAVPNNLIRAIVDANTTRKDFISDSVIKRNPKVVGVYRLVMKTGSDNFRASAIQG
VMKRIKAKGIEMVVYEPELKETEFFRSRVINDLEEFKQISDVILSNRMASELSDVAAKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-92 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_1918 YP_008522300.1 nucleotide sugar dehydrogenase VFG0963 Protein 3e-106 57