Gene Information

Name : Ser39006_1860 (Ser39006_1860)
Accession : YP_008522242.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : protein of unknown function DUF1722
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2063953 - 2064912 bp
Length : 960 bp
Strand : +
Note : PFAM: protein of unknown function DUF1722, protein of unknown function DUF523; KEGG: hypothetical protein

DNA sequence :
ATGACACTTGATCAGATTCCCGTTGGTATTAGTGCTTGTCTGCTTGGAAATCCGGTACGTTTTGATGGTGGCCACAAGCG
TTTTTCTTTCGCGGTAGAGCAGTTGACTCCTTATTTTGGTTTTGAATCGATATGTCCGGAAATGGCGATAGGGTTGCCAG
TGCCTCGTCCTGCGCTGCGGCTGGTGAAGGATGACCAGGGCATGGTCACTATGCGTGCCAGTAATGGTGCGCCGCTGGAT
GTCACCGAAAAAATGCAGCTGTTTGCAACGGAGTCTACACAGAAGCTTATGCATTTATGTGGTTACATCGTTTGTGCCAA
GTCCCCCAGTTGCGGTATGGAGCGGGTGAAGGTTTATGACGAATCTCAGAAGAATGCACGTAAAAGTGGCGTAGGGTTGT
TCACTCAGCAACTTATGACGTTAATGCCGTGGTTACCGGTTGAAGAGGATGGACGTCTGCATGATCCGGTGCTGCGTGAA
AATTTTATTGAGCGGGTTTTCACGTTGTATGAATTGAATCGACTATGGCAACAGGGGTTAAGTCGTGGTGCGTTGATGAA
TTTTCATAGCCGTTACAAACTGCTGCTGCTGGCGCACTCTCAACCGGGGTACCGAGAGTTGGGACGTTTCGTGGCCGCGA
TGGAACAATGGGATTCGCTGGCAGATTTTGCTGCGGAATACCGTTTACGGCTGATGAAACTGTTATCGCATCCGGCCAGT
CGGCGTAACCATACCAACGTGCTGATGCATGTGCAGGGCTATTTCCGTCGCCAGCTGACAACACTGCAACGACAGGAGTT
GACTCATCTTATTGAACGGTATCGTCAGGGTATGCAGCCGCTATTGGCGCCCATCACGTTGTTACGCCACTACCTGTCTG
AGTACCCGGATGCTTATTTGTCCCAGCAGCGTTATTTTGACCCTTACCCGGAAGCGTTGCGTTTACGTTATGGTCATTAG

Protein sequence :
MTLDQIPVGISACLLGNPVRFDGGHKRFSFAVEQLTPYFGFESICPEMAIGLPVPRPALRLVKDDQGMVTMRASNGAPLD
VTEKMQLFATESTQKLMHLCGYIVCAKSPSCGMERVKVYDESQKNARKSGVGLFTQQLMTLMPWLPVEEDGRLHDPVLRE
NFIERVFTLYELNRLWQQGLSRGALMNFHSRYKLLLLAHSQPGYRELGRFVAAMEQWDSLADFAAEYRLRLMKLLSHPAS
RRNHTNVLMHVQGYFRRQLTTLQRQELTHLIERYRQGMQPLLAPITLLRHYLSEYPDAYLSQQRYFDPYPEALRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 5e-95 61
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 3e-95 61
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 3e-95 61
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 3e-95 61
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-95 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_1860 YP_008522242.1 protein of unknown function DUF1722 VFG0490 Protein 1e-95 61