Gene Information

Name : Ser39006_1807 (Ser39006_1807)
Accession : YP_008522189.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2006214 - 2007260 bp
Length : 1047 bp
Strand : -
Note : KEGG: arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter

DNA sequence :
ATGAGTGACATCACTCGCAAACTCTCATTTTTAGACCGATATCTGACTGTCTGGATTTTTGCTGCAATGGCTCTGGGTGT
GAGTCTCGGTTTTTTAGTCCCTGGTGTAGAGAACTTCATTAACCGCTTTCAGGTGGAAACAACCAATATTCCGATTGCTA
CCGGGCTGATCCTGATGATGTATCCCCCTTTTGCCAAGGTACGGTATGAAGAGCTGCCAGACGTATTCCGCGACAGAAAA
GTGTTAACCCTGTCGCTGATCCAAAACTGGATCATCGGTCCGGCACTCATGTTCGCATTAGCCGTGATTTTCCTGCATGA
CAAACCGGAATACATGGTTGGGCTTATCATGATCGGTCTGGCGCGCTGTATCGCCATGGTGATTGTCTGGAATGAACTGG
CGAAAGGCTCAACGGAATATGCGGCGGGTCTGGTGGCGTTCAACTCGATATTTCAGGTGCTGTTTTTCAGCGCCTATGCC
TGGCTATTTATTACCATATTGCCGCCGTTCTTCGGATTGTCTGGTTCAATTGTTGATATCTCCATCGCGCAAATTGCCAA
GAGTGTGTTCATCTATCTGGGCATCCCCTGTATTGCCGGCGTACTGACCCGAGTGATCATGCTGCGCTTTGTTTCAAAAG
AGTGGTATCACGCCCACTTCGTTCCCAAGATCGGTCCTATTACCCTGGTTGCGCTGCTGTTCACCATTGTGGTGATGTTC
AGTCTGAAGGGGAAATTGATTGTCAGTCTCCCTTTCGATGTCGTACGTATTGCTATCCCTTTGCTTATCTACTTTGTTGC
TATGTTTGCCATCTCATTTTTCATGTGCAAACGCTTAGGCGCGAGTTATGAAAAGAGTGCAACACTCTCGTTTACCGCTG
CCAGTAATAACTTTGAACTCGCTATCGCGGTAGCCGTCGCTGTTTATGGCATCAACTCTGGTGCTGCTTTTGCCGCTGTC
ATCGGGCCGCTTGTTGAAGTGCCAGTGATGATTGGTCTGGTGAATGTTTCCCTTTGGATCAGACGAAAATACTTCCTTTC
AGTCTAA

Protein sequence :
MSDITRKLSFLDRYLTVWIFAAMALGVSLGFLVPGVENFINRFQVETTNIPIATGLILMMYPPFAKVRYEELPDVFRDRK
VLTLSLIQNWIIGPALMFALAVIFLHDKPEYMVGLIMIGLARCIAMVIVWNELAKGSTEYAAGLVAFNSIFQVLFFSAYA
WLFITILPPFFGLSGSIVDISIAQIAKSVFIYLGIPCIAGVLTRVIMLRFVSKEWYHAHFVPKIGPITLVALLFTIVVMF
SLKGKLIVSLPFDVVRIAIPLLIYFVAMFAISFFMCKRLGASYEKSATLSFTAASNNFELAIAVAVAVYGINSGAAFAAV
IGPLVEVPVMIGLVNVSLWIRRKYFLSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 6e-85 63
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 3e-106 62
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 2e-106 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_1807 YP_008522189.1 arsenical-resistance protein BAC0573 Protein 4e-118 71
Ser39006_1807 YP_008522189.1 arsenical-resistance protein BAC0004 Protein 7e-78 51