Gene Information

Name : Ser39006_1686 (Ser39006_1686)
Accession : YP_008522068.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.193
Position : 1864988 - 1866103 bp
Length : 1116 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD, Riboflavin-specific deaminase domain protein; KEGG: ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: bifunctional deaminase-red

DNA sequence : 
ATGGCTATACAGTCTGATGAATTTTATATGGCTCACGCATTGGCGCTGGCGCGGCGTGGTCGCTTTACGACGATGCCGAA
TCCGAATGTGGGATGCGTCATTGTGCGTGATGGACAAATTGTCGGCGAAGGTTATCACCATAAAGCCGGTGAGCCTCATG
CAGAGATCCATGCTTTGCGGACGTCGGGAAAGCAGGCCAACGGTGCAACGGTGTATGTAACGCTGGAACCGTGCAGTCAT
CATGGTCGTACTCCGCCTTGCGCTGATGCATTAATTGAGGCAGGAGTGGCAAGAGTTGTTGCGGCAATGCAGGATCCCAA
CCCCGAGGTGGCAGGGCGCGGTTTGTATCGTTTGCAGCAGGCCGGTATCGATGTTACCCACGGTGTCATGATGGCGGAAG
CCGAAAAGCTTAATCGGGGGTTTCTCAAGCGGATGCGTACCGGATTCCCCTATGTACAGTTAAAAATGGCGGCTTCGCTG
GATGGACGTACGGCAATGGCCTCCGGTGAAAGCCAGTGGATTACATCACCGCAGGCACGGCAGGATGTGCAGCGGTTTCG
GGCACAGAGTGCCGCTATTCTGAGTAGTAGCGCTACTGTGCTGGCTGATGACCCTTCACTTACCGTACGTTGGTCGGAAT
TGGATGAGGATACGCAACGTGTCTATCCGCAAGATCAACTGCGTCAGCCCGTGAGGATTATTGTCGATAGCCAACTACGG
GTGAAACCACAGCATCGTATTATCCATCAGCCGGGTATGACCTGGCTGGCGCGTCCCCAGCGGGATCAACAGCCGTGGCC
GGATACGGTTGAACAGCTTTTGGTTCCGCAACAAGGTGATGGTAGCGATTTGGTGGCATTAATGATGCTGCTGGGAAAGC
GTCAGATTAACTCGGTGTGGGTGGAGGCTGGTGCTCGCTTTGCCGGGGCGTTACTACAAGCAAATGTGGTGGATGAGTTG
ATTATCTACATGGCACCCAGACTGCTTGGGGATTTGGCTCGTCCGCTGTGTGTGTTGCCGGGACTGGAGACGTTGGCGCG
GGCACCTGAATTCTCAATGACAGATGTCCGATTGGTGGGGCCGGACCTGCGGATTATCCTGAAGCCACAGTACTGA

Protein sequence : 
MAIQSDEFYMAHALALARRGRFTTMPNPNVGCVIVRDGQIVGEGYHHKAGEPHAEIHALRTSGKQANGATVYVTLEPCSH
HGRTPPCADALIEAGVARVVAAMQDPNPEVAGRGLYRLQQAGIDVTHGVMMAEAEKLNRGFLKRMRTGFPYVQLKMAASL
DGRTAMASGESQWITSPQARQDVQRFRAQSAAILSSSATVLADDPSLTVRWSELDEDTQRVYPQDQLRQPVRIIVDSQLR
VKPQHRIIHQPGMTWLARPQRDQQPWPDTVEQLLVPQQGDGSDLVALMMLLGKRQINSVWVEAGARFAGALLQANVVDEL
IIYMAPRLLGDLARPLCVLPGLETLARAPEFSMTDVRLVGPDLRIILKPQY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-64 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-64 48