Gene Information

Name : Ser39006_1546 (Ser39006_1546)
Accession : YP_008521928.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1701889 - 1703094 bp
Length : 1206 bp
Strand : -
Note : KEGG: conjugal transfer protein TraF

DNA sequence :
ATGAAAGCCACATTAATAACACGCTGCCTGATGGTCGCCAGTCTGGCATCTTCACTGCCCACGGCGCAGGCAGCCGGTAC
CTGGTTTGAAGCCCGTAACGATGCGATGGGAGGAACCGGCGTCGCCTCCTCAAAATACGGCGCAGCGCCGCTGCTGAACC
CCGCCCTGCTGACAAAGTCGGGCCCCAGCGATGATATCAGCATTATCCTGCCTGCCGTGGGCGCCCAGGTCAGTGACCCA
GATAACCTGCAGGACGGTTTCGATAACGTCAAACACACCTGGGACAATCTGGAGAACACCACCGGTACCGGTCATTCCGC
TTCTTCAGCCGCTGACCTCAGAAAATCGCTGACCGATATCTCTGGTCACAGCGGTCGTGCAGATGCCGGTGTCGGTGCGA
TGATTGCGGTACCGAATGCCACCCTGCCGTTTGCCCTGGTCATTAAAGGCTGGGGACAGGCGAAAGCGCACGCCGTGGTG
AGTGACAGCGACCTGACGTATCTCGATGCTGCCAGCACCGGCCTTGTTCAGCCTGATGACTCCACGCTTAACAACCTGAC
TTCGCGGGCTGAAGGTGTAGCCGCACTGATCAGTGAGTACGGTATTGCCATGGCACATCCGTTTACCCTGGGAAAGGTGC
CGGTGTCCGTGGGGATCACCCCAAAATTCCAGCGTGTTGATACCTGGAACTACAACGTGGCCATCAACAACTACAGCACG
TCCGACTTTCACAGTGGTGACTGGCAGCGTTCAAAGAGCGGCGCCAACGTTGATCTTGGTTTTTCTGCTGACCTGACTCC
CGAGTGGACGGTAGCACTGGCAGTACAAAACCTCGTGGCACGCAGTGTCGATACCCGCGAAGTGAATGGCCTGCAGGACA
GTTTCAACATTCGCCCTCAGGCCACAGCCGGTACTGCGTGGAGCAATGGACTCGTTACCTTCGCGGCCGACATTGACATG
ACGCCCGCCAGTGGATTCGCCTCCGATGAAAAAAGACAGTATGCCAGCATCGGTGCCGAACTTAATGCCTGGTCATGGGC
GCAACTACGTGCTGGTTACCGCGCTGACATGCGTAACAGTGGCAACAATGTCGTGACGGCCGGCATCGGTATTTCTCCGT
TAGACGTCGTTCACCTCGATCTGACCGGCATGGCCGGAACGGATCGTACCTACGGTGCCGTGGCCCAGCTTTCTGTCACT
TTCTGA

Protein sequence :
MKATLITRCLMVASLASSLPTAQAAGTWFEARNDAMGGTGVASSKYGAAPLLNPALLTKSGPSDDISIILPAVGAQVSDP
DNLQDGFDNVKHTWDNLENTTGTGHSASSAADLRKSLTDISGHSGRADAGVGAMIAVPNATLPFALVIKGWGQAKAHAVV
SDSDLTYLDAASTGLVQPDDSTLNNLTSRAEGVAALISEYGIAMAHPFTLGKVPVSVGITPKFQRVDTWNYNVAINNYST
SDFHSGDWQRSKSGANVDLGFSADLTPEWTVALAVQNLVARSVDTREVNGLQDSFNIRPQATAGTAWSNGLVTFAADIDM
TPASGFASDEKRQYASIGAELNAWSWAQLRAGYRADMRNSGNNVVTAGIGISPLDVVHLDLTGMAGTDRTYGAVAQLSVT
F

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00459.1 unknown Not tested SHI-1 Protein 2e-68 47