Gene Information

Name : Ser39006_1531 (Ser39006_1531)
Accession : YP_008521913.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : Integrase catalytic domain, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1686458 - 1687381 bp
Length : 924 bp
Strand : +
Note : PFAM: Integrase catalytic domain, putative, Putative integrase, N-terminal; KEGG: integrase

DNA sequence :
ATGAAGCAGAAAAGTACCCGTTCCAAGATTGAGTGTTTCAGGAAAGCGTTCATTTCGCTTGCCAGAGCCGGGGCAGGGGG
ATACGCGACTATTGCAGATCGTCAGCGTATTGGGCGTTACTTTCTTGAACACCTTAACAATACAGGTATCAAGTTACGCA
GCGTTGACGCGTTAAAAGTGCGTTACGTAGAGAGTTATATTGAATACCGAAAGAGTTTAAATCTGAGCAATCGCACTCTG
CAGAATGAAATGTCAGTATTAAGGGGGATCTTCAGTGCTGCGGGGAAACACCGCTTGGCAGACCCTAAAAATGAACGACT
GAATAATAAATCGCTCGGTATTTCAGGCGTAAATCGTGATGGAACGAAAACGGCGTTAACACAAGATGAGTTTTTAAAAG
CCTTTAATGAAATTGAAAAACAGGATCGCGGTGTGGCTGCCACGATGAGACTGGCCTATGTTTTCGGATTAAGAACGAAA
GAGTCGGTTGAAGCCTGCAAATCATTATCAACCTGGAAACAGGCCGTTGAACGTGGTGATAAATCCATTCGTGTTGTGTT
TGGTACGAAAGGTGGCCGTCCCCGTGATACAACAATCATTGATCGCAATGAAGCCCGAAGGGCAATTTTGTATGCAGAAA
AAGAAGCCCAAGAGCGCAATGGTAAATTTATTGACAAGCCAGGCATTCATCAGGCAATTAACCGGTATCGATATTTTCTT
CGTAAAGCTGGTTTGAATGGTGAGAAAGCACCACATAGCATGCGCTATAATTTTGCCCGCGAACTTTCGAAATATCACAA
AGATAATGGTTTTAACGATAGCGAAGTCCTGGCACTGGTTTCAATGGATTTAGGTCACGGTGATGGCCGTGGGCGCTATA
TTAAACAGGTTTATTATCGGAATGATGTGGCGGAGGGGGACTGA

Protein sequence :
MKQKSTRSKIECFRKAFISLARAGAGGYATIADRQRIGRYFLEHLNNTGIKLRSVDALKVRYVESYIEYRKSLNLSNRTL
QNEMSVLRGIFSAAGKHRLADPKNERLNNKSLGISGVNRDGTKTALTQDEFLKAFNEIEKQDRGVAATMRLAYVFGLRTK
ESVEACKSLSTWKQAVERGDKSIRVVFGTKGGRPRDTTIIDRNEARRAILYAEKEAQERNGKFIDKPGIHQAINRYRYFL
RKAGLNGEKAPHSMRYNFARELSKYHKDNGFNDSEVLALVSMDLGHGDGRGRYIKQVYYRNDVAEGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 2e-87 56
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 2e-87 56
api85 CAF28559.1 putative integrase Not tested YAPI Protein 1e-47 48
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 2e-57 47
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 5e-64 46
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 3e-62 45
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 9e-47 45
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 9e-47 45
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 3e-48 42
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 3e-48 42