Gene Information

Name : Ser39006_1516 (Ser39006_1516)
Accession : YP_008521898.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : TraG domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1669501 - 1671030 bp
Length : 1530 bp
Strand : +
Note : PFAM: TraG domain-containing protein; KEGG: hypothetical protein

DNA sequence :
ATGACGGCTAATAGTTTTCTGGAGTATTTTCTGGTGTTGTTCGGCTGGATGCTGAACAACGCACTGTGGGACATTCTTCT
CAGTACGGGGTTGTTCGCCCTCCCTCTGGTTTTCAAAGTCCTGGGTATCTGGCTGAAGGTGCGGGAAGAGGGGGCCGATG
AGGGTAACAAAGGTGTACTGGCATTGCCGCGGGTTGAGCATGCACTCTACGTGTCGTTTTGCGTGATGTTGTTCTGCTGC
ATTCCGCTGCTGCCCGTTGATATCAACACCATTAAATTTGACAGTTCGCGGGCGAAACAGTGTGGGGTTAGCGTACCCAC
ACCACAGAACTCCGGTTATAAAGGGCTGGTCAACGATTTCGCCGGAAAGACGGCCGAGGTGCCAGTGTGGTGGTACCTTC
TGCATTTGATTTCCAAAGGCATCACGCAGGCGATGATTGCGTCAATCCCCTGTGGCGACCAGCTCCGTCAGTTGCGCTTT
GACGTGCAGAATACCAAAATTCGGGACCCCATCGTGCTGCAGGAAGTGCAAGATTTTGCCGACCAGTGCTACTCCCGTTC
GTACTTTAAGCTTAAGAACAGAAACAGCCAGCTGAGTGATGCCACCATCAACGCCGTGGGGTGGATTGGCAGCAGCTATT
TTCTTAATACAGCCGGTTATTATGATTACTACACGTCTATTGAACCACGCAGTCAGTGGCCTTATGACAACGTCCGGGAC
AGCGGCTATCCCAATGTGGGGAAAGGCGGCTATCCGACCTGTAAACAGTGGTGGTCTGACAGTACCAACGGTCTCAAAAC
AAGGGTATTGGCCAATATCGATGATTCAACAAAGACAGGGCTGCAACGGCAATTCAGTAAAACGCAGTGGGAAGAGATGG
CGCTGCGTTGGCTGGTGAGTCCCCGTAATGTCGGTTTATCGGGTAGCGGAGAAACTTACGCCGTTGGTAGTAGTGATACG
GCCTCCGGGTTGACTGGCAACGTCACCCGGCTTGTCTCTTCAATAGGTTTGGGGCTAAAGCAGGCGGAAGCCTTACCCGG
CTTTGATGCGCTGAAGCAGGCATTGCCGATGATCCAGGCACTCCTGGAAATGATGATCATCATCGTGATCCCGGTACTGA
TGATGTTCAGCGCCTATGAGCCGAAGACGGTGGTGACCATTTCGTTTGCACTGTTTGCTCTGATGTTTATCACGTTCTGG
TGGGAACTGGCGGGGTGGCTCGATGACAGACTCATTACCATCCTCTACCAAACCATGGCAGAACAGGGGATGTTAAATCT
TAGTGCCCCTCTTGTGGAATTTATGAGTTCACCGCGTGATGGCTGGATCATGAATATGGTGTTGGGGATGATGTATGTTG
TTTTCCCGGCATTTTGGATTGGATCACTTGGATGGGCGGGGGCTCATATAGGTAACATGGTTGACTCCGCAATGAACACT
GGAGCGAAAATGCCACAGCAAGCAGGTGGTGAAGGAGGTAAAGTTGCGGTCGGCGCTGTTAAAACTGCAGCTACTAAAGG
CAAAGGATAA

Protein sequence :
MTANSFLEYFLVLFGWMLNNALWDILLSTGLFALPLVFKVLGIWLKVREEGADEGNKGVLALPRVEHALYVSFCVMLFCC
IPLLPVDINTIKFDSSRAKQCGVSVPTPQNSGYKGLVNDFAGKTAEVPVWWYLLHLISKGITQAMIASIPCGDQLRQLRF
DVQNTKIRDPIVLQEVQDFADQCYSRSYFKLKNRNSQLSDATINAVGWIGSSYFLNTAGYYDYYTSIEPRSQWPYDNVRD
SGYPNVGKGGYPTCKQWWSDSTNGLKTRVLANIDDSTKTGLQRQFSKTQWEEMALRWLVSPRNVGLSGSGETYAVGSSDT
ASGLTGNVTRLVSSIGLGLKQAEALPGFDALKQALPMIQALLEMMIIIVIPVLMMFSAYEPKTVVTISFALFALMFITFW
WELAGWLDDRLITILYQTMAEQGMLNLSAPLVEFMSSPRDGWIMNMVLGMMYVVFPAFWIGSLGWAGAHIGNMVDSAMNT
GAKMPQQAGGEGGKVAVGAVKTAATKGKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api56 CAF28530.1 putative membrane protein Not tested YAPI Protein 0.0 83
YpsIP31758_3699 YP_001402653.1 hypothetical protein Not tested YAPI Protein 0.0 83
YE3465 YP_001007626.1 hypothetical protein Not tested YAPI Protein 0.0 83
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 9e-106 46
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 9e-106 46
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 2e-101 45
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-91 42
ORF C40 AAN62133.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-91 41