Gene Information

Name : Ser39006_1514 (Ser39006_1514)
Accession : YP_008521896.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein, PFL_4711 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1667721 - 1669139 bp
Length : 1419 bp
Strand : +
Note : TIGRFAM: integrating conjugative element protein, PFL_4711 family; KEGG: hypothetical protein

DNA sequence :
ATGAAAAAGAAAAAACAAACCCATCCGCTTTTGCCACTGACGTTGTTGGTTATCTTGACCGGCGGCGTTTCGTCTGCATA
TGCCGAAGTCACCGCCTCTGCAAGTGGCGTCTCCGCCAACGGGGCTATCAGTGATGGCCTGTTTTATTCGATTGGCGGGG
GTTCGGTGATATCTCCGCCCGCGTCCCGCAACAGCATGACGCGCCTGGGGATGAGCGGTGGCCTGAGCAGTGACCTGATG
TGCGGCAACTTCGACATTAAAACGACGGTGGGTAACCAGCTTAATGGCGTGACCAGCGGGTTTAAAGACCTGATGGGTAC
GGTTATTCAGGGCGCTACCGGCGCGGTTGCCAGCATGCCGGCGATGGTGATACAGCGCGCTAATCCGGGTCTGTATGAAA
TGCTGACCAACGGTGTGCTTCAGGCCGGCCTGAGTTTTGACAAAGCCAAACTGAACTGTCAGAACCTGGCCAATAAAATG
GCCGACTACACGATGGGAAACAAGTGGACGCAGGCGGCCGTGACCGAAGAGTACAAGAACATCGTCGCCTCAAGTGACGG
TGATGCGGTCAGCAGTGACCAGAAACTGCAGAAAGCGACCGGTGAGGACGGGGCTACCTGGATTGGGGGACAGAAACGCG
GTGGCAAAGGGCAACCGTCGATTAAGCCGACGCATGATCTCGCCAAAGCCGGCTACAACATGATGAACAACCTGCCGGTC
ACCAGTAACAGCACCGTGGGAGCATCCAGTTGCAACGGTTCGGTATGCCAGCGCTACTCAAACTCGGAGGACGCGGCGGC
AGCCGTGGTGAAAGTGCTGGGCGACCGGTCTATCCGGACGTGCCGTGAGGCCAGTGAATGCGGCAGCGGAGGAGATGAAA
ACGCCGCCGGCAGCACTGTCGCCGGCACAGGTTTCTCCCCCATGCTTGAAGATGCCACCAAAGAGAACCTCGAGCAGTTA
GACAAACTGGTCGGCGGCTCAGAAGCGCCCACCGCCGATAACCTGGCCAAACTGAAAACGGGCAGCCTGGTGGTGACCCG
CGGGGTCATCCAGTCCCTGAAAGATGACCCGGACAGCGCCGCACTGGTACAGCGCCTCGCAGGAGAACTGGCCATGTCTG
ACACCGTGGAGCAGGCGTTGACCATGCGCCGCATGTTGACCACCGGTCAGTCTGAGCCGAATGCGGCTGACCAGCCAGAA
GCACTGGCGGAAGGTGACCGTCGTATCGATGCGTTGGACCGGGAGCTTGCTGCACTGAGTAACGAAATGGCGCTGCGGAA
ATCCATCAGCAATAACAGCTTGCTCACTACCCTGGAACGCCAGGGCGCACGCAATCAGGACAGTCGTCTGCAGCAGCACA
GCGGAAGCCAGGACCAGGGTTTTAGCAGCATGAGCCAAAAATCAGGAGAGCAACAATGA

Protein sequence :
MKKKKQTHPLLPLTLLVILTGGVSSAYAEVTASASGVSANGAISDGLFYSIGGGSVISPPASRNSMTRLGMSGGLSSDLM
CGNFDIKTTVGNQLNGVTSGFKDLMGTVIQGATGAVASMPAMVIQRANPGLYEMLTNGVLQAGLSFDKAKLNCQNLANKM
ADYTMGNKWTQAAVTEEYKNIVASSDGDAVSSDQKLQKATGEDGATWIGGQKRGGKGQPSIKPTHDLAKAGYNMMNNLPV
TSNSTVGASSCNGSVCQRYSNSEDAAAAVVKVLGDRSIRTCREASECGSGGDENAAGSTVAGTGFSPMLEDATKENLEQL
DKLVGGSEAPTADNLAKLKTGSLVVTRGVIQSLKDDPDSAALVQRLAGELAMSDTVEQALTMRRMLTTGQSEPNAADQPE
ALAEGDRRIDALDRELAALSNEMALRKSISNNSLLTTLERQGARNQDSRLQQHSGSQDQGFSSMSQKSGEQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 6e-166 83
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 9e-165 83
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 1e-165 83
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 1e-164 81
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 8e-142 68
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 8e-142 68
PMI2572 YP_002152291.1 hypothetical protein Not tested Not named Protein 3e-126 59
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-73 41
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-70 41