Gene Information

Name : Ser39006_1513 (Ser39006_1513)
Accession : YP_008521895.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein, PFL_4710 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1666736 - 1667710 bp
Length : 975 bp
Strand : +
Note : KEGG: hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4710 family; PFAM: TraU family protein

DNA sequence :
ATGACACACTCCGCGTGGCGTTCGCGTCGGTTGTTATTGGCCACACTGCTGACCGGCAGCGGGCTGTGTATGGCCAGCGT
CAATACCGCCAGCCTGATTTCCAGCGCGGCCAGCGTATCCTGCATCAGCTGGAAGGTGAAGGGGATCTGCTATTGGTTGC
TGTGTACTCCCTTTGGTTGTTCTGTCAAAACGTCGGTAAAAGTTGAGCATTTTATCCCGGAAGCCGTGGTATCTGCGTAT
TCCGGGCCGGGGGATAATCCCTGGACAGAAATGGCCACCGTCAGTGATGCGGCCGGCAGCGGGGAAAGTGGCATTATTGG
CGCGCTTAGCGGCATCAGCGCCGGTGGCGGCCAGCAGGAAATGAAAGCCCCCGGGTTGCGCAAACAGAATCTGCATTTTC
ATTATGCCGATGCTTATGGACATCCGGCTACCACGCTTATCGGGGGACAGATTGCCGGGTATTCCTGCAAATCTGCCGCC
ACGCCTTTTGTTCCTTACTTTGTCAGTTCGCTGGATGCTCTGGTATGGCGCAGTGGTCTGCCTGAAGCCCTGTACCCGGA
AGCACTCATCCCTGGTCAACGTGAACTCGGCAGTCAGACAAGCGCCAACATGTGGGGCAATATTTACCCGCGCAGCGGCT
TTGTCACCCAGGAAGACAGCTATAAATCTGCAGCCGTTGTCGCTCAGCGCGTGGCCGATGTGATCACCCGCACCGGCCAG
CTTCACGTTTATCAGCCGCTCGTTGGTCAGCGGTCACCAGGTTACTGGCCCCCGGAGCCGGTAGAAGAGAATACCGGTAC
TCAGAACCATAAATGGCAACGCCTTTCTCCGGCGCTGTCGACCACCTGTGCTGTTTTCCCTGATACCGGCGCAACTGTCG
CCCAGGACGGTAACTATGCCTGGGCGCTTTGGCAACCCTATAGCTGCTGCAAACGTCGCGGGCAGACTTTCCTCTTCAGC
ACCGACTTTTCGTGA

Protein sequence :
MTHSAWRSRRLLLATLLTGSGLCMASVNTASLISSAASVSCISWKVKGICYWLLCTPFGCSVKTSVKVEHFIPEAVVSAY
SGPGDNPWTEMATVSDAAGSGESGIIGALSGISAGGGQQEMKAPGLRKQNLHFHYADAYGHPATTLIGGQIAGYSCKSAA
TPFVPYFVSSLDALVWRSGLPEALYPEALIPGQRELGSQTSANMWGNIYPRSGFVTQEDSYKSAAVVAQRVADVITRTGQ
LHVYQPLVGQRSPGYWPPEPVEENTGTQNHKWQRLSPALSTTCAVFPDTGATVAQDGNYAWALWQPYSCCKRRGQTFLFS
TDFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 7e-115 82
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 4e-105 81
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 9e-114 81
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 2e-92 72
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 5e-102 70
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 5e-102 70
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 2e-87 68
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 2e-76 52
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-69 50
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-68 50
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 6e-68 50
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 6e-68 50
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 7e-63 49
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-67 49