Gene Information

Name : Ser39006_1506 (Ser39006_1506)
Accession : YP_008521888.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein, PFL_4705 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1660126 - 1661649 bp
Length : 1524 bp
Strand : +
Note : TIGRFAM: integrating conjugative element protein, PFL_4705 family; KEGG: hypothetical protein

DNA sequence :
ATGAAAATAAAATCCAATGGTCTCGTCAAACTCATGGTGCCGCTGGCTATCCTCGGCACGGTGTTCATTGGTGTCAAATC
TTGCTCAACAGATGGCGGGGAGAAAAACGCGCAGGCCAATGCAGGAACGGCAGTGCCTGACCTGACGCCGGAGGACATGA
AGGCGATGGGCATTGAAGGGGACACGCCTCAGGACACCCTGCGCACGCTGGTCGGCAGTTTGAAGACGGTGACGAAGCGG
CAAAACCAGCTTGACGCCGACAACAAGGCTCTGGCGGAAGAAAATAAAAATCTGCAGCAGAGCAATCAGAACGTTGATGA
GCGTATCCATCAGGCGGTGATCAATGCGCAGTCAACGGCAGATAAAGAACAAAGCCATCTGAAAGGCCAGGTACAAGCAC
TGACTACACAGATTGGCGACCTCATGCAGAAATTGAAGGATAAAGGCAACGGCGGTCAGGGAACGATGACAGGAAATCCT
TCTACCATCGGCAGTGATATCCCCGTGGGGTTGGGGCTCGATGGCGGAGGCGTCGGGAGTGCCGTGCCCTCAACAGGGAG
CGATGGTCTCCTGTGGGTTGAACCTAAAGACGGCGTGGCGGTAGATGCCAGCGGCAAACCGGTTGGAGAAGGGAATACCA
ACATTGCCAACGGTTTTTCCTTTGCAACCTCCTTCCTGGATGATAACGCCATCACCCGTCAGAAAGCCGAGCTGGCCAAT
AAAACCAATGCCGGCAAAACCCTCAGTGGCAATAACGCCGCCGAGGGCCCCGTTGATCCGGTGTACACCCTGCCTGAAAA
TTCAACACTAATTGGCAGCCGGGCGATGACCGCGTTGCTCGGACGCGTCCCTATCGATGGAAAAGTCACCGACCCTTATC
CCTTCAAAGTGCTTATTGGCAAAGACAACCTGACCGCGAACGGTATCGACCTGCCGGATGTGCAGGGCGCAATTGTCTCC
GGCACGGCGACCGGTGACTGGACGCTGTCGTGCGTGCGCGGCTCGGTGACCAGCATCACGTTTGTTTTTTCTGATGGCAC
AGTACGTACCCTGCCACGGCCTGCCGGGCAGACCGACAGCCAGGGCGGAAACAACGGCAACAATGCTGGCAGTATTGGCT
GGCTGTCAGATGAAAACGGTATTCCCTGTCTCTCTGGCGAGCGGAAATCGAACGCATCGACCTATTTGCCCACACTCTTT
GCGCTCTCTGCCAGCAGCGCCGCTGGCGATGCGCTGGCCCAGAACCAAAATACTGCGCAGACGAACGCTTATGGTGGTGT
GACATCAACGCTGACGGGCGATGCCGGACAGTCTGTCCTCGGTAAAGCGGTCTCCGGGGGGATGCGGGATATGGCGGACT
GGGTGAAAGCCCGTTATGGCCAGACCTTTGATGCCATCTATGTACCCCCGGGCATGAAGGTGGCGGTCCATATCACCCGG
CAGCTGGCGATTGATTATGAAGAGAAAGGCCGCAAAGTGAAGTATGACTTCAGCCTGAGCCAGGCCGGCACGGGACTGGA
CTGA

Protein sequence :
MKIKSNGLVKLMVPLAILGTVFIGVKSCSTDGGEKNAQANAGTAVPDLTPEDMKAMGIEGDTPQDTLRTLVGSLKTVTKR
QNQLDADNKALAEENKNLQQSNQNVDERIHQAVINAQSTADKEQSHLKGQVQALTTQIGDLMQKLKDKGNGGQGTMTGNP
STIGSDIPVGLGLDGGGVGSAVPSTGSDGLLWVEPKDGVAVDASGKPVGEGNTNIANGFSFATSFLDDNAITRQKAELAN
KTNAGKTLSGNNAAEGPVDPVYTLPENSTLIGSRAMTALLGRVPIDGKVTDPYPFKVLIGKDNLTANGIDLPDVQGAIVS
GTATGDWTLSCVRGSVTSITFVFSDGTVRTLPRPAGQTDSQGGNNGNNAGSIGWLSDENGIPCLSGERKSNASTYLPTLF
ALSASSAAGDALAQNQNTAQTNAYGGVTSTLTGDAGQSVLGKAVSGGMRDMADWVKARYGQTFDAIYVPPGMKVAVHITR
QLAIDYEEKGRKVKYDFSLSQAGTGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 1e-156 72
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 1e-162 72
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 5e-164 71
t4268 NP_807865.1 hypothetical protein Not tested SPI-7 Protein 1e-118 55
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 2e-122 55
STY4570 NP_458655.1 putative exported protein Not tested SPI-7 Protein 6e-118 54
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-83 42
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 2e-84 41