Gene Information

Name : Ser39006_1505 (Ser39006_1505)
Accession : YP_008521887.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein, PFL_4704 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1659233 - 1660129 bp
Length : 897 bp
Strand : +
Note : KEGG: hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4704 family; PFAM: Protein of unknown function DUF3438

DNA sequence :
GTGAAACTAAAAATCCTGGCCGCGATGGGACTGATAATGACAACGGTTGGTGTGGCTCATGCCGTGGAGCTGATGAAGTG
GGAGCGGATCCCTCTGCAAATTCCTCTCAACGTGGGGCAAGAGCGGATCGTGTTTGTGGATAAAAACGTGCGGGTCGGGT
TCCCACCCTCCCTTAACGGCAAGTTGAGAGTACAAAGCAGCGGGGGCGCGGTCTATCTGGATGCCAGTGATGCCTTTCCT
GTGACGCGTTTGCAGTTGCAGAACAAGGAAAACGGCGAAATCATTTTGCTCGATGTCAGCGCTGCTGTGGGAAAAACGAC
CCGCGAACCGGTTCAGGTGGTGTATGACGGTGACGTGTCATCGGCTTCTGCCAGCGACAAAACGCAGGTCAGCGGTACCG
GCAGTCGCCATGGTCAATCGGTATCGACTCAGAATGCAGCGATGACAGAACGGCGCAAGCCAGCAAAGTTGAATGCTCCG
TTACCGGTGGTGTTGACTCGCTATGCCGCACAAAGCCTCTACGGCCCACTGCGCACCGTGGAGGCCGTGCCGGGTATCAG
TACCGTCGCGCTTAAAGTGCCTTCCCGGATCACTACTCTCTATCCCTCAGCGCCAGTGACCGTCAGTCCGCTGGCAGCCT
GGGGCCTTAACGGTTACAGCGTCGTTGCCCTGCAAGTGCGCAACACATCGGCGACAAAGGTCATTCTCGATCCCCGGGAA
CTGGAAGGTCAGTTTGTCTCGGCGACTTTCCAGCACCGATGGTTAGGGAATGCAGGGACGCCCGAGGATACCACGGTGTT
GTATTTGGTGACGGAAGGCCGTCCGGAAAGCGCATTCTTGTCCGAGCCCGTCGTGCCGTTGGTCAACGGCAAAAAGACGC
GGAGTACCCGTAAATGA

Protein sequence :
MKLKILAAMGLIMTTVGVAHAVELMKWERIPLQIPLNVGQERIVFVDKNVRVGFPPSLNGKLRVQSSGGAVYLDASDAFP
VTRLQLQNKENGEIILLDVSAAVGKTTREPVQVVYDGDVSSASASDKTQVSGTGSRHGQSVSTQNAAMTERRKPAKLNAP
LPVVLTRYAAQSLYGPLRTVEAVPGISTVALKVPSRITTLYPSAPVTVSPLAAWGLNGYSVVALQVRNTSATKVILDPRE
LEGQFVSATFQHRWLGNAGTPEDTTVLYLVTEGRPESAFLSEPVVPLVNGKKTRSTRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 1e-100 76
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 1e-98 74
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 2e-100 73
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 5e-81 65
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 5e-81 65
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 7e-77 58
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 2e-58 48
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-54 48
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 8e-58 47
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-58 47
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 1e-57 47
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 9e-60 46
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-46 46