Gene Information

Name : Ser39006_1489 (Ser39006_1489)
Accession : YP_008521871.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : peptidase A24A prepilin type IV
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1647941 - 1648621 bp
Length : 681 bp
Strand : +
Note : PFAM: peptidase A24A prepilin type IV; KEGG: type IV prepilin peptidase

DNA sequence : 
TTGACCGGACCGGTGACGTTGTTAACGCTGATTGGTCCGTGGCCGCTGTTATTGCCGCTGTTCTGTCTTGCGTTGCTTAT
TTTCCGCCTGGAAACTGCCCAGGTGACGGGGGTGATGACGGAATATGGGCATCCGGCGTCACCGGATCCTGAAGTACAGG
CTGTCAAACAGCATATCTGGCTGCATGCCATGGCCCTGACCGTGATGGTAATGCTGTCGTCACTCAGCAGGCCGTTTGAG
CTGATGACGTCGGGATTATTTGTACTGTTTATTTTCCGGATGAGTCTTATCGATACCCTGACAGGGTGGTTGCCCCGGGA
GTTTACCTGGCCATTTCTGATCGCGGGTCTGTGTGTTGCCGCTGAACATCATGTCCTGTCTTCCCACGCCATAATGTCAC
TTATCCTGTTGATCGCCGGATTACTGGTTCGAAAACTGGGAGAACGGTTTGCTCATCGTGAAGTGCTTGGCCTGGGCGAT
GTCTGGCTGGTTGCTGGGTTAGGTGCCTGGTTTGGTTCGCCACTTTCCCTGTTCTCACTCATGGGGGGAGTGATGGGTTT
TATCCTCTGGTATGCCGGTTCGAGTACGGTTTCCCGCGGTGGCCCGATGGGGCCATGGTTGGGTTACAGTGCGCTGCTGT
CCATGATCCTCTCTATTTCTGACCCTATTCTGATGTGGTGA

Protein sequence : 
MTGPVTLLTLIGPWPLLLPLFCLALLIFRLETAQVTGVMTEYGHPASPDPEVQAVKQHIWLHAMALTVMVMLSSLSRPFE
LMTSGLFVLFIFRMSLIDTLTGWLPREFTWPFLIAGLCVAAEHHVLSSHAIMSLILLIAGLLVRKLGERFAHREVLGLGD
VWLVAGLGAWFGSPLSLFSLMGGVMGFILWYAGSSTVSRGGPMGPWLGYSALLSMILSISDPILMW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilU CAF28493.1 putative cysteine-type peptidase Virulence YAPI Protein 4e-36 53
YpsIP31758_3728 YP_001402682.1 type IV prepilin peptidase Virulence YAPI Protein 2e-32 47
YE3499 YP_001007660.1 type IV prepilin peptidase Virulence YAPI Protein 8e-34 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_1489 YP_008521871.1 peptidase A24A prepilin type IV VFG2316 Protein 3e-34 46