Gene Information

Name : Ser39006_1487 (Ser39006_1487)
Accession : YP_008521869.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : PilS domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1646871 - 1647461 bp
Length : 591 bp
Strand : +
Note : PFAM: PilS domain-containing protein; KEGG: hypothetical protein

DNA sequence : 
ATGTCAGCTAATCCGTTGTCTGTTTCAGTTCGCCGACAGCCTCATCGTGGGTGGGGCATTATTGAGAATGGGACCCTCGC
TATTCTGATAATCATTGTCATTGTGTATGTCGTCAGCAAGTTGTGGGGATTATGGACCCAGAAAAGTGTGGCCATGGAAA
CCACCAATTATCAGAGCCTGATCACCTATGTCCGGGGCAATTTCAAAGGGCCTGGTGGTTATGATTTCACCAGCGCCAGC
ACGATGACCGGTACCGTTATTGCCGCAGGCGGTGCGAAGGGGATGACCGTTCAGGGGGATGTCACCTCCGGGTCTGCCAC
GATGTTTAACACCTTTGGTGGGCAAGTGATATTAACGCCGGTGGCTTCAAATGGCTTCAACAACGGTTTTTCCCTGTCTT
CAGCCAAAATTCCACAGGATGCCTGTATCTCTATCGCTCAGCAGATGGGCAATGGTGCTTATTCCAGCGTCAGCATTAAC
AGTACGGCGCACACTGACGGCAATGTGACAGCGGAAACTGCGGCTAAGGAGTGCGTCAAGGACAGCGGCGGTACCGGGCA
GAACACGCTGACCTTTACAGTGAATGGGTAA

Protein sequence : 
MSANPLSVSVRRQPHRGWGIIENGTLAILIIIVIVYVVSKLWGLWTQKSVAMETTNYQSLITYVRGNFKGPGGYDFTSAS
TMTGTVIAAGGAKGMTVQGDVTSGSATMFNTFGGQVILTPVASNGFNNGFSLSSAKIPQDACISIAQQMGNGAYSSVSIN
STAHTDGNVTAETAAKECVKDSGGTGQNTLTFTVNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3500 YP_001007661.1 putative type IV prepilin Virulence YAPI Protein 5e-32 52
pilS YP_001402683.1 type IV pilus biogenesis protein Virulence YAPI Protein 8e-33 51
pilS CAF28492.1 putative major pilin subunit Virulence YAPI Protein 2e-33 51
pilS AAC98887.1 PilS Virulence SPI-7 Protein 1e-26 50
pilS NP_458635.1 prepilin Virulence SPI-7 Protein 2e-26 50
pilS NP_807846.1 prepilin Virulence SPI-7 Protein 2e-26 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_1487 YP_008521869.1 PilS domain-containing protein VFG2315 Protein 1e-32 52