Gene Information

Name : Ser39006_1484 (Ser39006_1484)
Accession : YP_008521866.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : type IV pilus biogenesis protein PilP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1643655 - 1644167 bp
Length : 513 bp
Strand : +
Note : TIGRFAM: type IV pilus biogenesis protein PilP; KEGG: hypothetical protein

DNA sequence :
ATGCACAACGTTAACTCCGCCTGCCGGCTCTGGCTGCTTGGCATTCTCGCGGTATTCAGCCAGCAGAGCCTGGCGGAAGA
TCGTCCGGCTTCTGCCGACGCGGACAATGTCACTATTGGTCAGCTTGAGGCCATACAGTCCCGTAACTTTCTTCTGGAAC
AACAGGTACAGACCGCCAGACTCAAAAGGCAGCTTCGTGAAAGTCAAAGCGAAAGCCAGGTCAGCCAGGCGGCGAATGTG
CCGGCGTCGTTGCCTTTCATGCCGTCTAACCCGCTGAGCATGAATGTCGGACAATCGGCCGCTGGCGCGACGTCATCGAA
ACGTGTCATGGGCGCTATCCGTCTGCAGGAGATTTACGGGCGTGGCACCCAGCTGCATGCGCGCATTGTGCTCCCTCAGG
GAGGGATCACCGAAGTGTCTGCCGGTGACCTACTTCCGGGGAGCAAGCTGAGCGTGACGTCGGTGACCTTAAATGCGGTG
AAACTCAGTGACGGAACAGCGCTGTCGTTCTGA

Protein sequence :
MHNVNSACRLWLLGILAVFSQQSLAEDRPASADADNVTIGQLEAIQSRNFLLEQQVQTARLKRQLRESQSESQVSQAANV
PASLPFMPSNPLSMNVGQSAAGATSSKRVMGAIRLQEIYGRGTQLHARIVLPQGGITEVSAGDLLPGSKLSVTSVTLNAV
KLSDGTALSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3502A YP_001007664.1 putative type IV pilus protein Virulence YAPI Protein 3e-18 44
pilP1 YP_001402686.1 type IV pilus biogenesis protein PilP Virulence YAPI Protein 1e-22 43
pilP CAF28489.1 putative fimbrial protein Virulence YAPI Protein 2e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_1484 YP_008521866.1 type IV pilus biogenesis protein PilP VFG2312 Protein 8e-19 44