Gene Information

Name : Ser39006_1481 (Ser39006_1481)
Accession : YP_008521863.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : PilM inner membrane family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1640230 - 1640667 bp
Length : 438 bp
Strand : +
Note : PFAM: PilM inner membrane family protein; KEGG: PilM protein

DNA sequence : 
ATGGGATACGGTATTGCTGCTCTGTCCCTGATTTTTTTGCTGATAGTTGGCAACGTACAGACCCGTGATGCCTCTCGTCT
TGTGCATCAGAACATCCAGGTCAATGCCAACCTGTTGGCCGCAGACATCCTCAGGCTGGCGAGCGCAGTCAATGACTGGC
GGTATACCCATCAGCTTGCCGAGGGGCCGCTTGTCACCGGGCAGTTTGGCATGCTTCCGGCAACTGATAGCCGCATTCAG
GCCGCTATTCAAGGGGGACGTCTCTGGCTCTGGTCTGTTGATCGTCCGGGGCTGGTCGATTCTCTACATCGTCAGTCGGC
GGGTTCTGCGCTGGTCTGCACGGTGTCCGGCGGACGCCTCAAAATGTCTGATGGTACCGATATGAATTTGCTCCTTCCCG
CCGGCGTGGCGGAAGGCAATGTCGTTTATCTCAATTAA

Protein sequence : 
MGYGIAALSLIFLLIVGNVQTRDASRLVHQNIQVNANLLAADILRLASAVNDWRYTHQLAEGPLVTGQFGMLPATDSRIQ
AAIQGGRLWLWSVDRPGLVDSLHRQSAGSALVCTVSGGRLKMSDGTDMNLLLPAGVAEGNVVYLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilM CAF28486.1 putative exported protein Virulence YAPI Protein 2e-38 61
YpsIP31758_3735 YP_001402689.1 PilM protein Not tested YAPI Protein 3e-38 61
YE3505 YP_001007667.1 putative type IV pilus operon exported poprotein Virulence YAPI Protein 2e-37 60
pilM NP_458629.1 putative exported protein Virulence SPI-7 Protein 5e-21 46
pilM NP_807841.1 hypothetical protein Virulence SPI-7 Protein 5e-21 46
pilM AAF14813.1 PilM Virulence SPI-7 Protein 3e-21 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_1481 YP_008521863.1 PilM inner membrane family protein VFG2309 Protein 6e-38 60