Gene Information

Name : Ser39006_1271 (Ser39006_1271)
Accession : YP_008521653.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1410741 - 1411403 bp
Length : 663 bp
Strand : +
Note : KEGG: two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein

DNA sequence : 
ATGCGATTACTTCTGGTAGAAGATGATCCTATGGTGGGCAAAGGGTTACAACAGGGTCTGAAAAAGAGTGGCTACACAGT
AGACTGGGTTCAAGACGGCAGAGCAGCCGTTCTCGCATTGGAAACAACCCCTTATGCACTCTTGCTGCTTGACCTTGGAC
TGCCAAAGCAGGATGGAATGTCAGTGCTCAAAACGCTACGGCTCCATAACGAAGTGCTTCCTGCGATCATCATTACCGCC
CGAGATGCGCTGAGTGACAGGGTCAATGGGCTCAATAACGGCGCTGACGATTACATCGTGAAGCCGTTCGCTCTGGAAGA
GCTGCTAGCACGTATTAATGCGGTATGTCGTCGCCAGTCAGGCAGGGCAAAGACCGAACTGGTTGTAGGCGCGATAAGAC
TTGATCCCGTGCGTCATCTGATATGGTTTCATGATCAGCAAGTCAGTTTATCCGTCAGAGAATTTGCGATCTTACATGAA
CTGATGCGTGAACCTTATGCGGTCTTGTCTCGCGAGCAGTTGGAAGATCGCCTGTATGGGTGGGGGGAGGAGTTAAGCAG
CAATGTGATCGAAGTGCATATTTCCAATCTGCGTAAAAGGCTCAGCCCTGAGGTGATCCGCACCATACGTGGAGTGGGTT
ATCGCATTGGTGAAGGAAAATGA

Protein sequence : 
MRLLLVEDDPMVGKGLQQGLKKSGYTVDWVQDGRAAVLALETTPYALLLLDLGLPKQDGMSVLKTLRLHNEVLPAIIITA
RDALSDRVNGLNNGADDYIVKPFALEELLARINAVCRRQSGRAKTELVVGAIRLDPVRHLIWFHDQQVSLSVREFAILHE
LMREPYAVLSREQLEDRLYGWGEELSSNVIEVHISNLRKRLSPEVIRTIRGVGYRIGEGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-33 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_1271 YP_008521653.1 two component transcriptional regulator, winged helix family BAC0487 Protein 1e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_1271 YP_008521653.1 two component transcriptional regulator, winged helix family VFG0473 Protein 3e-34 46