Gene Information

Name : Ser39006_0126 (Ser39006_0126)
Accession : YP_008520508.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : Integrase catalytic domain, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 122563 - 123441 bp
Length : 879 bp
Strand : -
Note : PFAM: Integrase catalytic domain, putative, Putative integrase, N-terminal; KEGG: putative DNA-binding prophage protein

DNA sequence :
ATGAGTAAATTAAGTCGTGAAATGACCACACTGGCTAAACAGGCCGGTGGGAGCTACAAAACAGTTCATGATCGCATCCG
TATTATGGACAGGCTCTGCCGTCACTTACTGGCGCTGAATATTCAGGTGCGTGACATCAAGTACCTCAAAACCAGACATA
TCGAAAGTTATGTCGCTGAGCGCTTGTCAAAATGCATTGCCGTTCGCACGCTTCACAACGAAATGGCAGCTCTGCGCGCA
GTGCTCAGGCAGGGAGGACGGGAAAAGCTCGTCGCTTCTGAGCGCCTGACGAATAAAACACTGGGACTGGGTGGCGCAAG
CCGTGCGGGTACAAAGTTTGCCATCCCGGATGCGCTCTATCAGTCTGTGCTGAACACTGCCCGTCAGGACGATGCCGGTC
TGGCCTGTGCACTTCAGCTTGCCCGGTTGCTGGGGTTGCGCTCTCAGGAGACGGTGCAGTGCGCCAGTTCGTTGAAAACA
TGGGAAAAGCAGCTTGAACTCCATCAACAAACGCTCACCGTGGTATTTGGCACCAAAGGCGGCAGGCCGCGTGAAACCCG
GATTATCGATCGCGAAGCCATTCAACGAGCAGTGAAAGCGGCGCTAAAGGTGGCTGAGGCGCGTAACGGCAGGTTGATCG
ATAAATCCGACCTGAAAACCGCCATGAACTTCTGGCGCACACAGACCACCCGATTGGGGCTGACCGGTCACTATTCTCCG
CACAGCCTGCGCTACGCATGGGCGCAGGATGCAATCCGTTATTACCTGTCACAAGGATTTTCCCGTAGTGAAGCCAGAGC
GTTAACGTCAATGGATCTCGGCCATGGTGATGGCCGGGGCCGCTACGTTGAACGCGTTTACACCCGGAAGGAGGATTGA

Protein sequence :
MSKLSREMTTLAKQAGGSYKTVHDRIRIMDRLCRHLLALNIQVRDIKYLKTRHIESYVAERLSKCIAVRTLHNEMAALRA
VLRQGGREKLVASERLTNKTLGLGGASRAGTKFAIPDALYQSVLNTARQDDAGLACALQLARLLGLRSQETVQCASSLKT
WEKQLELHQQTLTVVFGTKGGRPRETRIIDREAIQRAVKAALKVAEARNGRLIDKSDLKTAMNFWRTQTTRLGLTGHYSP
HSLRYAWAQDAIRYYLSQGFSRSEARALTSMDLGHGDGRGRYVERVYTRKED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 3e-84 63
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 3e-84 63
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 3e-73 57
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 3e-73 57
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 4e-75 52
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 2e-72 51
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 2e-61 49
api85 CAF28559.1 putative integrase Not tested YAPI Protein 3e-48 48
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 7e-53 43
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 7e-53 43