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Name : Ser39006_1174 (Ser39006_1174) Accession : YP_008521556.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1298403 - 1299920 bp Length : 1518 bp Strand : + Note : PFAM: tRNA synthetase class II (D K and N), nucleic acid binding OB-fold tRNA/helicase-type; TIGRFAM: lysyl-tRNA synthetase; HAMAP : Lysyl-tRNA synthetase; KEGG: lysS, lysyl-tRNA synthetase DNA sequence : ATGTCTGAACCTCAATCACAGGGTGCCGAGCAGGCGCAGGATCTTAATAACGAACTGAAAGCACGTCGTGAAAAACTGGC AGCGCTGCGTGAAAAAGGCATTGCATTCCCGAATGATTTTCGCCGCGACAGCATCTCTGAACAACTGCACGCCAGTTACG ACGATAAAGAAAATGAAGAACTGGAAGCACTGAATCTTGAAGTCACGGTAGCTGGCCGGATGATGACCCGCCGTATCATG GGGAAAGCCTCTTTCGCGACGTTACAGGACGTTGGTGGCCGTATTCAATTGTATGTTTCCCGTGATGATCTGGCGGAAGG CATTTACAACGAACAGTTCAAAAAGTGGGACCTGGGGGATATTCTCGGCGCACGCGGTAAGCTGTTCAAAACCAAAACCG GCGAGCTCTCTATTCACTGTACTGAACTGCGTCTGTTAACCAAAGCGCTGCGTCCGTTGCCGGATAAATTCCACGGTCTG GCGGATCAGGAAACCCGTTATCGTCAGCGTTATCTGGATTTGATCGCTAACGAGGAGTCCCGTCACACTTTCCGCATCCG TTCAAAGGTGATGGCGGCGATCCGCGGCTTTATGGTTGGTAACGGTTTTATGGAAGTGGAAACGCCGATGATGCAGGTTA TCCCCGGCGGTGCGGCGGCTCGCCCGTTCGTGACTCATCACAATGCGTTGGATATTGATATGTATCTGCGCATCGCGCCG GAACTGTATCTGAAACGTCTGGTGGTGGGAGGGTTTGAGCGCGTATTTGAAATCAACCGCAACTTCCGTAATGAAGGCGT TTCCCCGCGTCATAACCCTGAGTTCACCATGATGGAGCTTTATATGGCGTATGCCGATTATAAAGACCTGATTGTGTTGA CGGAAAGCCTGTTTCGTACGCTGACGCAGGACGTGCTAGGCACGACGACCATACAGTACGGCGATCAGACTTTCGATTTC GGCAAACCGTTTGAAAAGCTGACCATGCGCGAAGCGATTTGCAAATATCGGCCGGAAACCGATGTCGCCGATCTGGATGA TTTTGATAAAGCCGCCGCGATTGCTCAATCTTTGGGGATCAAAATCGAGAAAAGCTGGGGCTTAGGCCGCATCGTCACCG AGATCTTTGAAGAAACGGCGGAAAGTAATCTGATTCAACCCACCTTCATTACTGAATATCCGGCAGAAGTTTCTCCGCTG GCACGTCGTAATGATCAGAACCCGGATATTACTGATCGTTTCGAGTTTTTCATCGGTGGTCGTGAAATTGGTAACGGTTT CTCCGAGCTGAATGATGCAGAGGATCAGGCTGCACGTTTCGCCGATCAGGTTCGAGCCAAAGACGCGGGCGATGATGAAG CCATGTTCTATGATGAAGATTATGTCACGGCGCTGGAGCATGGTATGCCGCCGACGGCAGGTCTGGGTATCGGTATCGAC CGTATGGTAATGCTGTTCACCAATAGCCATACGATACGCGACGTGATCCTGTTCCCGGCCATGCGTCCGCAGAAATAA Protein sequence : MSEPQSQGAEQAQDLNNELKARREKLAALREKGIAFPNDFRRDSISEQLHASYDDKENEELEALNLEVTVAGRMMTRRIM GKASFATLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL ADQETRYRQRYLDLIANEESRHTFRIRSKVMAAIRGFMVGNGFMEVETPMMQVIPGGAAARPFVTHHNALDIDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTESLFRTLTQDVLGTTTIQYGDQTFDF GKPFEKLTMREAICKYRPETDVADLDDFDKAAAIAQSLGIKIEKSWGLGRIVTEIFEETAESNLIQPTFITEYPAEVSPL ARRNDQNPDITDRFEFFIGGREIGNGFSELNDAEDQAARFADQVRAKDAGDDEAMFYDEDYVTALEHGMPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-167 | 68 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-90 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ser39006_1174 | YP_008521556.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 2e-167 | 68 |
