Gene Information

Name : Ser39006_1170 (Ser39006_1170)
Accession : YP_008521552.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase xerC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1293668 - 1294567 bp
Length : 900 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; HAMAP : Tyrosine recombinase xerC, Tyrosine recombinase xerD; KEGG: site-specific tyrosine recombinase XerD; PFAM: integrase family protein, integrase domain protein SAM domain protein

DNA sequence : 
ATGCATGAACAGGATCAGGCATTGATTGAGCAGTTTCTCGATGCCTTATGGCTGGAGCGGAATCTGGCGGAGAATACGCT
GGCGTCTTATCGGCTGGATTTGCAGTCGCTGGCCGAGTGGCTGGCGCATCACGACAATCATCTATTGCAGGTTCAATCAC
TGGATTTACAAGCATTTTTGGCGGAACGGATCGAGGGTGGCTATAAAGCGACCAGTTCGGCTCGTCTGTTGAGTGCCATG
CGGCGCCTGTTTCAATATCTTTATCGGGAAAAACAGCGGCTGGACGATCCTAGTGCGGTGCTCTCTTCTCCCAAGTTACC
CCAGCGTTTACCAAAAGACTTGTCGGAGGCGCAAGTCGACTCTCTATTGAAGGCACCCAGCGTCGAGCAACCGCTTGAAC
TGCGGGATAAAGCCATGCTGGAAGTGTTGTACGCCACTGGGTTGCGTGTCTCTGAACTGGTGGGACTGACCATCAGTGAT
GTCAGCCTGCGTCAGGGGGTGGTGCGCATAGTCGGAAAAGGTAACAAGGAACGGCTGGTACCGCTGGGGGAAGAAGCGGT
TTACTGGCTGGAGCAGTACCTGGAATACAGCCGTCCCTGGTTACTGAATGGTCGGACACTGGATATCATGTTTCCCAGTA
ACCGGAGTCAGAAAATGACACGCCAGACTTTCTGGCATCGTATCAAGCACTATGCGATTCTCGCCTCTATTGATAGTGCG
AAACTCTCTCCGCATGTTTTGCGTCATGCCTTTGCGACCCACTTATTGAACCACGGCGCCGATTTGCGGGTTGTACAGAT
GCTATTGGGTCATAGTGACCTTTCCACCACGCAAATTTATACACATGTCGCGACAGAGCGCCTTAAACAACTGCATAAAC
AGCATCATCCTCGGGCATGA

Protein sequence : 
MHEQDQALIEQFLDALWLERNLAENTLASYRLDLQSLAEWLAHHDNHLLQVQSLDLQAFLAERIEGGYKATSSARLLSAM
RRLFQYLYREKQRLDDPSAVLSSPKLPQRLPKDLSEAQVDSLLKAPSVEQPLELRDKAMLEVLYATGLRVSELVGLTISD
VSLRQGVVRIVGKGNKERLVPLGEEAVYWLEQYLEYSRPWLLNGRTLDIMFPSNRSQKMTRQTFWHRIKHYAILASIDSA
KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHKQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-59 57
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-59 57