Gene Information

Name : VAPA_1c06240 (VAPA_1c06240)
Accession : YP_008514427.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Virulence
Product : putative type VI secretion system effector, Hcp1 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 690461 - 690943 bp
Length : 483 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTGCAGACATGTTTTTGAAGCTCGAAGGCGTCGACGGTGAATCCAAGGACGATTCGCACAAGAAGGAAATCGACGT
TCTCTCCTGGAGCTGGGGTGCCAGCCAGTCCGGCACCGGCCACGTCGGCGGCGGCTCGGGCGCCGGCAAGGTGAGCGTGC
AGGACCTCTCGGTCACCAAGTATGTGGATGCCTCCTCGCACCTGCTGCTGCTCGACTGCTGCAACGGCCAGCACATCAAG
AAGGGCACGCTGGTGGTCCGCAAGGCCGGAGCCACGCCGCTCGAGTACGTCAAGCTCACGATGGAAGACATCATCGTCAG
CAACATCCACACCGGCGGCAGCGGCGGCGAAGACCGCCTGACCGAAACCATCACGCTGAACTTCTCGAAGTTCAAGTACG
AGTACACGCCGCAGAAGGCCGACGGCTCCGGCGACGGCACCAAGGAAACCGGCTGGGACATCGCCGCCAACAAGAAGGTC
TGA

Protein sequence : 
MAADMFLKLEGVDGESKDDSHKKEIDVLSWSWGASQSGTGHVGGGSGAGKVSVQDLSVTKYVDASSHLLLLDCCNGQHIK
KGTLVVRKAGATPLEYVKLTMEDIIVSNIHTGGSGGEDRLTETITLNFSKFKYEYTPQKADGSGDGTKETGWDIAANKKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0302 NP_454882.1 conserved hypothetical protein Not tested SPI-6 Protein 3e-25 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAPA_1c06240 YP_008514427.1 putative type VI secretion system effector, Hcp1 family VFG2071 Protein 2e-25 56