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Name : pilB (VAPA_1c43780) Accession : YP_008518126.1 Strain : Genome accession: NC_022247 Putative virulence/resistance : Virulence Product : type 4 fimbrial assembly protein PilB Function : - COG functional category : - COG ID : - EC number : - Position : 4634871 - 4636604 bp Length : 1734 bp Strand : + Note : - DNA sequence : ATGGCTGCTGCCGAACTTCCTGTTAAAGAAAACACGCAAATCGCCCTCCCGGGCCTTGCGCGCGCCTTGGTTTCGGCCGG CAAGCTTCCCGCGAAGACTGCGGAAGACATCTACCAGAAGTCGCTCAACGGCCGCACCAGCTTCATTGCCGAGCTGACCG GCAGCGGCGCCGTCTCGGCCGCCGACCTCGCCCATACGCTTTCCAGCGCCTTCGGCGCGCCGCTGCTGGACCTGGACGCC ATCGACCACCAGCGCCTGCCCAAGGACCTGCTTGACCCGAAGCTGTGCCACGCCTACCGGATCGTGGTTCTCAGCAAGCG CAACAACCGTCTCATTGTTGCAACGGCCGACCCCTCGGACCAGCAGGCGGTGGAAAAGATCAAGTTCGCGTCCCAGATGG GCGTGGACTGGGTCATTGCCGAATACGACAAGCTGTCGCGCATGATCGAAGCCGCCGCGGTCAGCGCGGCGGAAACCATC AACAGCATCGTCGGCGCCGAGTTCGAGTTCGACGACGTCACGGCGGACACCTCGGGCGACGCCAACGAACAGGCGATTGC CGAAGTCGAGGACGCGCCGGTCGTGCGCTTCCTGCACAAGATGCTGCTCGACGGCGTCAGCATGCGGGCCTCGGACATCC ACTTCGAGCCCTACGAGCACAACTACCGCGTGCGCTTTCGCATCGACGGCGAGCTGCGCGAGATCGCGAGCCCGCCCACG CTCATCAAGGACAAGCTGGCCTCGCGGATCAAGGTCATTTCACGGCTCGACATTTCCGAGAAGCGCGTGCCGCAGGACGG CCGCATGAAGCTCAAGATCGGTCCCGACCGGGTCATCGACTTCCGCGTCAGCACGCTGCCCACGCTGTTCGGCGAGAAGA TCGTGATCCGTATTCTCGACCCGAGCAGCGCGCGCCTGGGCATCGACGCCCTGGGCTACGACGCCGACGAAAAGGAGCGC CTGCTGCATGCGATCGGGCGGCCCTACGGCATGGTGCTGGTGACGGGCCCCACCGGTTCGGGCAAGACGGTTTCGCTCTA CACCTGCCTGAACCTGCTGAACCAGCCGGGCGTCAACATCGCAACGGCGGAAGATCCTTCCGAAATCAACCTGCCGGGCG TGAACCAGGTGAACGTCAACGAGCGTGCCGGACTCACCTTCGCCACGGCGCTGCGCGCCTTCCTGCGGCAGGATCCCGAC ATCATCATGGTCGGCGAAATCCGGGACCTCGAAACCGCCGACATCTCGATCAAGGCCGCGCAAACGGGCCACCTGGTCCT CTCGACGCTGCACACCAACGACGCGCCGACCACGCTCACGCGCATGCGGAACATGGGCATTGCGCCGTTCAACATTGCCT CCAGCGTGATCCTCATCACCGCGCAGCGGCTCGCGCGGCGCCTGTGCCACATGTGCCGCGCGCCGGCCGACGTGCCGCGC CAGGCGCTGCTCGATGCGGGCTTCAGGGAAGAACAGCTCGACGGTACCTGGAAGCCCTATCGGCCGGTCGGCTGCGCGGC GTGCAGCAACGGCTACAAGGGCCGGGTCGGCATCTACCAGGTGATGCCGATCTCGGACGCCATCCAGACCATCATCCTGC GCGACGGCAGCGCACAGGACATCGCGCGACAGTCCGAGGCCGAGGGCGTGCGCTCGCTGCGGCAGTCCGGGCTGCGAAAA GTCATGCAAGGGCTCACCTCACTCGAAGAAGTGGTGGCGGTCACCAACGAATAA Protein sequence : MAAAELPVKENTQIALPGLARALVSAGKLPAKTAEDIYQKSLNGRTSFIAELTGSGAVSAADLAHTLSSAFGAPLLDLDA IDHQRLPKDLLDPKLCHAYRIVVLSKRNNRLIVATADPSDQQAVEKIKFASQMGVDWVIAEYDKLSRMIEAAAVSAAETI NSIVGAEFEFDDVTADTSGDANEQAIAEVEDAPVVRFLHKMLLDGVSMRASDIHFEPYEHNYRVRFRIDGELREIASPPT LIKDKLASRIKVISRLDISEKRVPQDGRMKLKIGPDRVIDFRVSTLPTLFGEKIVIRILDPSSARLGIDALGYDADEKER LLHAIGRPYGMVLVTGPTGSGKTVSLYTCLNLLNQPGVNIATAEDPSEINLPGVNQVNVNERAGLTFATALRAFLRQDPD IIMVGEIRDLETADISIKAAQTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCHMCRAPADVPR QALLDAGFREEQLDGTWKPYRPVGCAACSNGYKGRVGIYQVMPISDAIQTIILRDGSAQDIARQSEAEGVRSLRQSGLRK VMQGLTSLEEVVAVTNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-79 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-79 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_008518126.1 | type 4 fimbrial assembly protein PilB | VFG0112 | Protein | 2e-143 | 53 |
| pilB | YP_008518126.1 | type 4 fimbrial assembly protein PilB | VFG2426 | Protein | 2e-105 | 53 |
| pilB | YP_008518126.1 | type 4 fimbrial assembly protein PilB | VFG0233 | Protein | 6e-135 | 52 |
| pilB | YP_008518126.1 | type 4 fimbrial assembly protein PilB | VFG1880 | Protein | 3e-133 | 48 |
| pilB | YP_008518126.1 | type 4 fimbrial assembly protein PilB | VFG0182 | Protein | 1e-83 | 44 |
| pilB | YP_008518126.1 | type 4 fimbrial assembly protein PilB | VFG2048 | Protein | 7e-79 | 42 |
