Gene Information

Name : fliP (VAPA_1c43350)
Accession : YP_008518084.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4594160 - 4594921 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence :
ATGATGCGCACCGCCCGCCAACGAAGCCTTCGCGGCGTCGTGCTGATGCTGCTCGCCCTGGCGCTGCCGGCGGTGGCGTG
GACGCAGGGCCTGCCCGGCCTCACCAGCACGCCCGGCCCCGGCGGCAGCCAGACCTGGTCGCTCAGCGTGCAGACGCTGG
TGATGCTGACCTCGCTCACCTTCCTGCCGGCATTGCTGCTGAGCATGACGAGCTTCACGCGTATCCTCATCGTGCTGGGC
CTGCTGCGCACGGCCATCGGCACGCAGTCGTCGCCGCCCAACCAGATCCTGGTCGGCCTGTCGCTGTTCCTGACCTTCTT
CGTGATGTCGCCGGTGTTCGACAAGGTCCACGACGAGGCCTACAAGCCATTCTCCGAAAACAAGATCACGGCCGAGAAGG
CGCTCGAGAAAGGCATTGCGCCGTTCAAGTCCTTCATGCTGAAGCAGACGCGGGAAAACGACCTGGCCCTCTTCGCCAGG
CTCGCGAAGATCCCCGACATGCAGGGGCCGGAAGAAGTGCCGCTGCGCATCCTGCTGCCCTCCTTCGTGATCAGCGAGCT
GAAGACCGCGTTCCAGATCGGCTTCACCATCTTCATTCCGTTCCTGATCATCGACCTGGTGGTGGCCAGCGTGCTCATGT
CGATGGGCATGATGATGGTGCCGCCCGCCTCCATCGCGCTGCCCTTCAAGCTGATGCTGTTCGTCATGGCCGACGGCTGG
CAGCTTCTGATCGGCGCACTGGCCCAGAGCTTTTATCTTTAG

Protein sequence :
MMRTARQRSLRGVVLMLLALALPAVAWTQGLPGLTSTPGPGGSQTWSLSVQTLVMLTSLTFLPALLLSMTSFTRILIVLG
LLRTAIGTQSSPPNQILVGLSLFLTFFVMSPVFDKVHDEAYKPFSENKITAEKALEKGIAPFKSFMLKQTRENDLALFAR
LAKIPDMQGPEEVPLRILLPSFVISELKTAFQIGFTIFIPFLIIDLVVASVLMSMGMMMVPPASIALPFKLMLFVMADGW
QLLIGALAQSFYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-32 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-32 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-31 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 4e-32 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 4e-32 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 5e-32 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 5e-32 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 2e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_008518084.1 flagellar biosynthetic protein FliP VFG2338 Protein 2e-70 75
fliP YP_008518084.1 flagellar biosynthetic protein FliP VFG2494 Protein 1e-66 73
fliP YP_008518084.1 flagellar biosynthetic protein FliP VFG1259 Protein 1e-57 65
fliP YP_008518084.1 flagellar biosynthetic protein FliP VFG2016 Protein 2e-51 58
fliP YP_008518084.1 flagellar biosynthetic protein FliP VFG0044 Protein 3e-32 41
fliP YP_008518084.1 flagellar biosynthetic protein FliP VFG0394 Protein 6e-31 41