Gene Information

Name : VAPA_1c35770 (VAPA_1c35770)
Accession : YP_008517334.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3776724 - 3777371 bp
Length : 648 bp
Strand : +
Note : -

DNA sequence : 
ATGACGCTGCGCATTTCCAGGCTGGGCAAGCGCTACGGCGACGTGCCCGTGTTCGAGAACGTGACGCTCAGCGTCGAGAC
CGGCGAGTTCGTCGCCATCGTCGGCGAATCGGGCGTCGGCAAGTCGACGCTGCTCAACTGCATGGCCGGGCTCGACAGCT
GGGACACGGGCACGGTCACGCACGACGGCACCGACATCGGCGCGCTCGATGGCGAGGCCTGTGCGCTCTGGCGCCGCCGC
CATGTGGGCTTCGTGTTCCAGGCCTTTCACGTGCTGCCGCACCTGGACGTGGGGCAGAACGTCTCGCTGCCGCTGATGCT
GCTGGGCCAGCGCGATGAAGGCCGCGTCGCGCACATGCTCGATGCGGTGGGCCTGCCCGGCATGGGCGCGCGCCTGCCGC
AGACACTCTCGGGCGGTCAGCTGCAGCGCGTGGCGATCGCGCGCGCGCTGGTGCACCGGCCCGCCCTGCTGCTCGCCGAC
GAGCCCACGGGCAACCTCGACCCCGGCACCGCTTCGAAGGTGATGGAACTGCTGATCGGCCAGACGCGCGAGCACGGCGC
TTCGCTGGTGCTGGTGACGCATTCCGAGAGCGCAGCAGCCCGTGCGGACCGCCTGCTGCACCTCACCGCCGAGGGAATCC
GCGCCTGA

Protein sequence : 
MTLRISRLGKRYGDVPVFENVTLSVETGEFVAIVGESGVGKSTLLNCMAGLDSWDTGTVTHDGTDIGALDGEACALWRRR
HVGFVFQAFHVLPHLDVGQNVSLPLMLLGQRDEGRVAHMLDAVGLPGMGARLPQTLSGGQLQRVAIARALVHRPALLLAD
EPTGNLDPGTASKVMELLIGQTREHGASLVLVTHSESAAARADRLLHLTAEGIRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAPA_1c35770 YP_008517334.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 2e-32 45
VAPA_1c35770 YP_008517334.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 1e-33 45
VAPA_1c35770 YP_008517334.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 4e-39 44
VAPA_1c35770 YP_008517334.1 ABC transporter, ATP-binding protein CP001581.1.gene598.p Protein 1e-37 41