Gene Information

Name : VAPA_1c33940 (VAPA_1c33940)
Accession : YP_008517153.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3582858 - 3583532 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence :
GTGCGCATATTGCTTGTCGAAGATGACAGTGCGTTGGCAGACGCTGTCTGCAGCTATCTGCTTGCGAAGGCATTCGTGGT
CGACGTGGCGTCCAGCCTTGCCGAAGCCCGCGGCGCCCTGCTTTCGGTGCGATACGCCGCCGTGCTGCTCGACCTGCACC
TGGGCGACGGCGACGGCCTTTCGCTGCTGCCCCAGGTACGCGCGCTGCGCGAGCCGCCCATCGTCATCGTGCTGACGGCG
CGCGACCAGGTCACCGACCGCATCCGCGGGCTCGACGCCGGCGCCGACGACTACCTCATCAAGCCCTACGACCCGGCCGA
GCTGCTGGCGCGGCTGCGCGCGGTGGAGCGGCGGCGCAGCGCCGGCAGCTCGCCGGTGCTGCATCTCGGAACGCTGGAGA
TCGACCTGGCACAGGACAGGGTTCGCAAGGACGGCAACCCGGTCGTCCTCACCCAGAAGGAATGGGCCCTGCTGCGCGTG
ATGGCCACACGGCCCGAACGCATCCACACCCGCGAGAACCTGGCCGCTGCGCTCTACGGCTTCGGCGACGAGGCCGACAG
CAACACGCTCGAGGTGTTCATCAGCCGGCTGCGGCGCAAACTGGGCAAGAGCCACATCCAGACGCTGCGCGGCCTCGGCT
ATCGGCTGTCGACCTCGGCAGGCGACGAAGAATGA

Protein sequence :
MRILLVEDDSALADAVCSYLLAKAFVVDVASSLAEARGALLSVRYAAVLLDLHLGDGDGLSLLPQVRALREPPIVIVLTA
RDQVTDRIRGLDAGADDYLIKPYDPAELLARLRAVERRRSAGSSPVLHLGTLEIDLAQDRVRKDGNPVVLTQKEWALLRV
MATRPERIHTRENLAAALYGFGDEADSNTLEVFISRLRRKLGKSHIQTLRGLGYRLSTSAGDEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAPA_1c33940 YP_008517153.1 two component transcriptional regulator, winged helix family VFG0473 Protein 1e-22 41